PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vang06g06010.1
Common NameLR48_Vigan02g184100
Organism
Vigna angularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family bHLH
Protein Properties Length: 506aa    MW: 55659.8 Da    PI: 6.9734
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Vang06g06010.1genomeSNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH11.70.000494024341855
                     HHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  18 safeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +++  L++++ +      +K + a++L +A+ YIk Lq
  Vang06g06010.1 402 DKITALQQIVSPF-----GKTDTASVLFEAIGYIKFLQ 434
                     7888899999887.....8******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS508889.642384433IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.104.8E-8399441IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.01E-9399451IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.41E-4402438No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 506 aa     Download sequence    Send to blast
MTEESAGNTV ATSITPLNWW YLQANSISSW NDTNNTWNNQ PNPNSSSSCE EDISVSTSFT  60
NASNHSTLTV ESSRRLIDPP APSSNEFMGE HASDNQLWTH VLSGVGSNGE LQSGQEIGEK  120
FLGALSSKSM TSTMFQPVCD YLKKLDHSSW EYSGSTSLNS FEKHLNGFNE AMIENNERLT  180
KLSNLVSTCS IAPPDPEVSS HFDPQTNNMT LNSSMDHFPQ SDHFKQPFGD STCSLGGVAN  240
RNSGVFPSYD HDTKIKQEFH ASEVQGSVYG KSLNANGYQN GFNGFSVGDS CKLYHGMPNL  300
PPCTRNFSDV ISFNSRFGRP VIGIHAQKPS MKYLNVSEPK KQGLQAPSPI RTNINGKGEG  360
TTREVKKKRS EESSDAMLKK LKQDTSTASS SKVQAPKVKL GDKITALQQI VSPFGKTDTA  420
SVLFEAIGYI KFLQEQVQLL SNPYLKANCH KDPWGSLDRK DKDDTKLDLR SRGLCLVPTS  480
CTPLVYRESS GPDYWTPAYR GCLYR*
Cis-element ? help Back to Top
SourceLink
PlantRegMapVang06g06010.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150410.0AP015041.1 Vigna angularis var. angularis DNA, chromosome 8, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017414146.10.0PREDICTED: transcription factor bHLH111-like isoform X1
TrEMBLA0A0L9TYW00.0A0A0L9TYW0_PHAAN; Uncharacterized protein
TrEMBLA0A0S3SNW30.0A0A0S3SNW3_PHAAN; Uncharacterized protein
STRINGXP_007143772.10.0(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF101162629
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G31050.14e-53bHLH family protein
Publications ? help Back to Top
  1. Yang K, et al.
    Genome sequencing of adzuki bean (Vigna angularis) provides insight into high starch and low fat accumulation and domestication.
    Proc. Natl. Acad. Sci. U.S.A., 2015. 112(43): p. 13213-8
    [PMID:26460024]