PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Vang06g04030.3 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
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Family | bZIP | ||||||||
Protein Properties | Length: 471aa MW: 52013.2 Da PI: 6.3604 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 30.3 | 9.4e-10 | 184 | 225 | 4 | 45 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45 k rr+++NReAAr+sR+RKka++++Le +L++ ++L Vang06g04030.3 184 QKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQEL 225 6889*************************9777777666555 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 3.4E-8 | 175 | 228 | No hit | No description |
SMART | SM00338 | 8.6E-8 | 181 | 244 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.415 | 183 | 227 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 7.9E-7 | 185 | 225 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14708 | 4.26E-22 | 185 | 237 | No hit | No description |
SuperFamily | SSF57959 | 8.44E-7 | 185 | 228 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 188 | 203 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF14144 | 7.1E-32 | 267 | 342 | IPR025422 | Transcription factor TGA like domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 471 aa Download sequence Send to blast |
MSLPVIPHGQ KHSCVCVEDE KGTARGMPSF NPQLPNSNAC YTEGSTVDSF RLSDFDQSVG 60 YRIEDAVALS GNSILDSLKV SSQTISRGVI QLGSFDKLPT SLDKSILTNQ TEQQSLQFQK 120 VHTSNLVTGD TEHQEEFAMA DASPRTDIST DADTDDKNPQ FDRNQALAAV ASDSSDRSKD 180 KTDQKTLRRL AQNREAARKS RLRKKAYVQQ LESSRLKLTQ LEQELQRARQ QGVFISSSGD 240 QAHSMSGNGA MAFDAEYARW LEEQNRQINE LRSAVNSHAG DTELCMIIDG VMAHYDEIFR 300 LKANAAKADV FHLLSGMWKT PAERCFLWLG GFRSSELLKL LVNQLEPLTE QQLVGITNLQ 360 QSSQQAEDAL SQGMEALQQS LSETLSTGSL GSSGSSGNVA NYMGQMAMAM GKLGTLEGFI 420 KQADNLRQQT LQQIHRILTT RQSARALLAI HDYFSRLRAL SSLWLARPRD * |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional regulator involved in defense response. {ECO:0000250|UniProtKB:Q7X993}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Vang06g04030.3 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | BT093315 | 0.0 | BT093315.1 Soybean clone JCVI-FLGm-24E7 unknown mRNA. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_017414991.1 | 0.0 | PREDICTED: transcription factor TGA6-like | ||||
Refseq | XP_017414992.1 | 0.0 | PREDICTED: transcription factor TGA6-like | ||||
Swissprot | Q6IVC2 | 0.0 | TGAL1_ORYSJ; Transcription factor TGAL1 | ||||
TrEMBL | A0A0S3SKZ3 | 0.0 | A0A0S3SKZ3_PHAAN; Uncharacterized protein | ||||
STRING | XP_007142625.1 | 0.0 | (Phaseolus vulgaris) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G12250.2 | 1e-151 | TGACG motif-binding factor 6 |
Publications ? help Back to Top | |||
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