PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vang06g04030.2
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family bZIP
Protein Properties Length: 489aa    MW: 54041.5 Da    PI: 6.3601
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Vang06g04030.2genomeSNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_125.52.8e-08184241462
                     XCHHHCHHHHHHHHHHHHHHHHHH...HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   4 lkrerrkqkNReAArrsRqRKkae...ieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 
                      k  rr+++NReAAr+sR+RKk +   +  L+  v++Le+ +     +l +l++e ++ +++
  Vang06g04030.2 184 QKTLRRLAQNREAARKSRLRKKTSyrnVVTLQAYVQQLESSRL----KLTQLEQELQRARQQ 241
                     6888******************86222677**********994....377888887776666 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1704.9E-7175242No hitNo description
SMARTSM003380.0022181244IPR004827Basic-leucine zipper domain
PROSITE patternPS000360188203IPR004827Basic-leucine zipper domain
PfamPF141447.5E-32285360IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 489 aa     Download sequence    Send to blast
MSLPVIPHGQ KHSCVCVEDE KGTARGMPSF NPQLPNSNAC YTEGSTVDSF RLSDFDQSVG  60
YRIEDAVALS GNSILDSLKV SSQTISRGVI QLGSFDKLPT SLDKSILTNQ TEQQSLQFQK  120
VHTSNLVTGD TEHQEEFAMA DASPRTDIST DADTDDKNPQ FDRNQALAAV ASDSSDRSKD  180
KTDQKTLRRL AQNREAARKS RLRKKTSYRN VVTLQAYVQQ LESSRLKLTQ LEQELQRARQ  240
QVGCNYSLEG VFISSSGDQA HSMSGNGAMA FDAEYARWLE EQNRQINELR SAVNSHAGDT  300
ELCMIIDGVM AHYDEIFRLK ANAAKADVFH LLSGMWKTPA ERCFLWLGGF RSSELLKLLV  360
NQLEPLTEQQ LVGITNLQQS SQQAEDALSQ GMEALQQSLS ETLSTGSLGS SGSSGNVANY  420
MGQMAMAMGK LGTLEGFIKQ ADNLRQQTLQ QIHRILTTRQ SARALLAIHD YFSRLRALSS  480
LWLARPRD*
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional regulator involved in defense response. {ECO:0000250|UniProtKB:Q7X993}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapVang06g04030.2
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0933150.0BT093315.1 Soybean clone JCVI-FLGm-24E7 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017414991.10.0PREDICTED: transcription factor TGA6-like
RefseqXP_017414992.10.0PREDICTED: transcription factor TGA6-like
SwissprotQ6IVC20.0TGAL1_ORYSJ; Transcription factor TGAL1
TrEMBLA0A0S3SKZ30.0A0A0S3SKZ3_PHAAN; Uncharacterized protein
STRINGXP_007142625.10.0(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF14703494
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G12250.21e-145TGACG motif-binding factor 6
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]
  2. Chern M, et al.
    Interaction specificity and coexpression of rice NPR1 homologs 1 and 3 (NH1 and NH3), TGA transcription factors and Negative Regulator of Resistance (NRR) proteins.
    BMC Genomics, 2014. 15: p. 461
    [PMID:24919709]