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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Vang06g03920.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
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Family |
C2H2 |
Protein Properties |
Length: 497aa MW: 54533.9 Da PI: 10.1335 |
Description |
C2H2 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Vang06g03920.1 | genome | SNU | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | zf-C2H2 | 13.9 | 0.00016 | 385 | 408 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHH.T CS
zf-C2H2 1 ykCpdCgksFsrksnLkrHirt.H 23
y+Cp+Cg +F ++ + H ++ H
Vang06g03920.1 385 YTCPKCGCVFETSQRFAAHVSSrH 408
9******************99888 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 497 aa
Download sequence Send
to blast |
MSLNSFLSGS NPTTMPILKG SYSRETVHVA PPPIITNVKA SDLLKQQLLS VPALAKVLGG 60 TSSRSTARPQ PAPPLRLHRF LDDFPSETPQ KSTPQKAREA ATVTNKDTET EKKYDGRIHS 120 NPHKKNGPYT CPKCKGVFDT SQRISLNSFT TMANNFSTTL FPLSASNAVQ KSEALTVKGM 180 SQLGLSQRVK SLRKISLATK RRAVMFHGTE KGKGKEVLRA HFSDLSPTSL DVDGGDTESI 240 LRKSQIVREK LENAVCNTRI EENNKKAKEM LQAKLLSAFA SESDAAVGET SSTPQRGSFL 300 NHFAYPFPNR SSAHFSQTDT EVDKSIILCA TPLRVCLPGE SVYGGQKARN GSVGEAVEDV 360 CCSRGDESEY DGRMHSNPYK KNGPYTCPKC GCVFETSQRF AAHVSSRHYR YETKSERKKR 420 MMAKIRRRSL RLEWENGALS VVADDGSRRN SSVFAPAEVK IETESVVRLQ LAPPPGWPKI 480 TEAAGAVRIK LEPLDN*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP015041 | 0.0 | AP015041.1 Vigna angularis var. angularis DNA, chromosome 8, almost complete sequence, cultivar: Shumari. |