PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vang06g02360.1
Organism
Vigna angularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family bHLH
Protein Properties Length: 675aa    MW: 74440.6 Da    PI: 5.0242
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Vang06g02360.1genomeSNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH29.11.8e-092713111055
                     HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     r+RR+riN+++  L+ l+P+      +K++ +++L +Av+Y+k Lq
  Vang06g02360.1 271 RKRRERINERLRILQNLVPNG-----TKVDISTMLDEAVQYVKFLQ 311
                     9******************97.....8******************9 PP
2HLH31.53.1e-105986381055
                     HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +rRR+riN+++  L+ l+P+      +K++ +++Le+Av+Y+k Lq
  Vang06g02360.1 598 QRRRERINERLKILQNLVPNG-----TKVDISTMLEEAVQYVKFLQ 638
                     8******************97.....8******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.116261310IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474598.64E-14263326IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.107.1E-12267320IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003533.7E-11267316IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000835.14E-11270315No hitNo description
PfamPF000101.0E-6271311IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088813.656588637IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.9E-9594643IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.108.2E-12598647IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.7E-12598653IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000838.71E-11598642No hitNo description
PfamPF000101.4E-7598638IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009555Biological Processpollen development
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 675 aa     Download sequence    Send to blast
MESSQQISEE WGSLCGLHTT EEADFMAQLF GGTYCSVTEK HYGNTTFGFW PAHESTTVTM  60
KATNSNSYFL PNVTDINLCF SQGSSSSIDS GNSVFSTTSS GPYYCDPATN FDSVSMAFFL  120
GDAQFSPHSF HCYDNSINEN TDEESSLDPV ALADNNLQAK REYEMMVSEY AHEDRSENLE  180
NLTKRLRNSK EVSKTLRNTK LKKNSKSASM NKNEDDRSLN LEGLGCFSQG DSNASLKPNG  240
GALKDPAPPS LLRKSRATKG PATDPQSLYA RKRRERINER LRILQNLVPN GTKVDISTML  300
DEAVQYVKFL QLQIKLLSSD DMWMYAPIAY NADFMSQLLD NCSLPENLCG NFHLGIPSAT  360
WPGHESTILT VTSINDSPYF PTTADNSNSN YLCFSQGSCS TSDSSNIFRA TSGNKHCLND  420
PVANIGYVSM GFAKFSPYNV QGSDSQQMNE NTDQDLCPEV IADKNSQDHQ ECEVLVSEAA  480
TEDITTNLEK SGKRSRGSMQ VRKSKKNAKS VKKPKSDSIS NSEEGRSPDL QGCCSDDDDS  540
NASQELNGGG SPNLSLEDST SLKLKGKKST ASRGSATDPQ SVYARDVISR NIPFCTTQRR  600
RERINERLKI LQNLVPNGTK VDISTMLEEA VQYVKFLQLQ IKLLSSDDLW MYAPIAYNGM  660
NIGLDLNIIP TKQP*
Cis-element ? help Back to Top
SourceLink
PlantRegMapVang06g02360.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150410.0AP015041.1 Vigna angularis var. angularis DNA, chromosome 8, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017413210.10.0PREDICTED: transcription factor bHLH84-like
SwissprotQ7XHI97e-48BH084_ARATH; Transcription factor bHLH84
TrEMBLA0A4D6N8I10.0A0A4D6N8I1_VIGUN; Aprataxin
STRINGXP_007143115.10.0(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF80733121
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G14760.38e-48bHLH family protein