PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vang05g08590.2
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family NAC
Protein Properties Length: 152aa    MW: 17473.4 Da    PI: 10.5942
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Vang05g08590.2genomeSNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM97.91.5e-3088450127
             NAM  50 kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyr 127
                      v++++ ew fF+++d+ky++g+r nr t++gyWkatgk+++++s +++l+g+kk+Lvfy grapk +kt+Wvmheyr
  Vang05g08590.2   8 VVRNKDPEWLFFCPHDRKYPNGHRLNRGTTHGYWKATGKNQKIKS-GSALIGMKKILVFYIGRAPKEKKTNWVMHEYR 84 
                     4567788********************9999**************.9******************************8 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100531.2451101IPR003441NAC domain
SuperFamilySSF1019413.14E-321091IPR003441NAC domain
PfamPF023658.9E-151384IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 152 aa     Download sequence    Send to blast
LFDVDLSVVR NKDPEWLFFC PHDRKYPNGH RLNRGTTHGY WKATGKNQKI KSGSALIGMK  60
KILVFYIGRA PKEKKTNWVM HEYRPTLKEL DGTNLGQVYS YLLLLLFGIF AFSSLLPWCF  120
DIKLFVSFNS SIVFFPSRGV LTRGRSKHLS L*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A1e-2618454141NO APICAL MERISTEM PROTEIN
1ut4_B1e-2618454141NO APICAL MERISTEM PROTEIN
1ut7_A1e-2618454141NO APICAL MERISTEM PROTEIN
1ut7_B1e-2618454141NO APICAL MERISTEM PROTEIN
3swm_A1e-2618457144NAC domain-containing protein 19
3swm_B1e-2618457144NAC domain-containing protein 19
3swm_C1e-2618457144NAC domain-containing protein 19
3swm_D1e-2618457144NAC domain-containing protein 19
3swp_A1e-2618457144NAC domain-containing protein 19
3swp_B1e-2618457144NAC domain-containing protein 19
3swp_C1e-2618457144NAC domain-containing protein 19
3swp_D1e-2618457144NAC domain-containing protein 19
4dul_A1e-2618454141NAC domain-containing protein 19
4dul_B1e-2618454141NAC domain-containing protein 19
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator activated by proteolytic cleavage through regulated intramembrane proteolysis (RIP) (PubMed:18443413, PubMed:24329768). Calmodulin-regulated transcriptional repressor. Binds several synthetic promoters with randomly selected binding sites (PubMed:17947243). Functions synergistically with SNI1 as negative regulator of pathogen-induced PR1 expression and basal resistance to a virulent strain of P.syringae. Binds directly to the promoter of the PR1 gene (PubMed:22826500). Acts as positive regulator of innate immunity. Involved in the effector-triggered immunity (ETI) induction of immunity-related gene expression (PubMed:24329768). Mediates osmotic stress signaling in leaf senescence by up-regulating senescence-associated genes (PubMed:18443413). {ECO:0000269|PubMed:17947243, ECO:0000269|PubMed:18443413, ECO:0000269|PubMed:22826500, ECO:0000269|PubMed:24329768}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapVang05g08590.2
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150350.0AP015035.1 Vigna angularis var. angularis DNA, chromosome 2, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017430850.15e-58PREDICTED: protein NTM1-like 9 isoform X1
RefseqXP_017430852.15e-58PREDICTED: protein NTM1-like 9 isoform X2
SwissprotF4JN355e-47NTL9_ARATH; Protein NTM1-like 9
TrEMBLA0A0L9UZJ91e-56A0A0L9UZJ9_PHAAN; Uncharacterized protein
TrEMBLA0A0S3RLR71e-56A0A0S3RLR7_PHAAN; Uncharacterized protein
STRINGXP_004502779.11e-55(Cicer arietinum)
STRINGGLYMA02G38710.11e-55(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35580.37e-48NAC transcription factor-like 9
Publications ? help Back to Top
  1. Zheng XY, et al.
    Spatial and temporal regulation of biosynthesis of the plant immune signal salicylic acid.
    Proc. Natl. Acad. Sci. U.S.A., 2015. 112(30): p. 9166-73
    [PMID:26139525]
  2. Guo T, et al.
    Lamin-like Proteins Negatively Regulate Plant Immunity through NAC WITH TRANSMEMBRANE MOTIF1-LIKE9 and NONEXPRESSOR OF PR GENES1 in Arabidopsis thaliana.
    Mol Plant, 2017. 10(10): p. 1334-1348
    [PMID:28943325]