PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vang05g07970.1
Organism
Vigna angularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family bZIP
Protein Properties Length: 298aa    MW: 33062.9 Da    PI: 6.358
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Vang05g07970.1genomeSNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_143.47.4e-14125179357
                     XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57 
                     elkr rrk +NR +ArrsR+RK+a+++ Le  v++L+ eN +L k+ +  +++  
  Vang05g07970.1 125 ELKRLRRKVSNRNSARRSRRRKQAQLADLELQVEKLKVENATLYKQFNDASQHFR 179
                     79******************************************99888777665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.0E-10123187IPR004827Basic-leucine zipper domain
PfamPF001701.2E-11125175IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.806125188IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.41E-9126177No hitNo description
Gene3DG3DSA:1.20.5.1702.3E-7127163No hitNo description
PROSITE patternPS000360130145IPR004827Basic-leucine zipper domain
CDDcd147027.45E-7144179No hitNo description
Gene3DG3DSA:1.20.5.101.7E-4164197No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 298 aa     Download sequence    Send to blast
LAASQQSLTP SSVFSGHGCF KRMTTTESDL DNDFPNLDEL RYLNLAGTDV FAAFQNLLPW  60
TRFEACELLE YCFVISLWLI FGAFGSPVSA NKPEGWKNHT KGATSGSSEP SDEDGPCEQS  120
TNSVELKRLR RKVSNRNSAR RSRRRKQAQL ADLELQVEKL KVENATLYKQ FNDASQHFRE  180
ADTNNRVLKS DVEALRAKVK LAEDMVTRGS FTTLNNQLLP TQCQVNTPPP LNTTNLRRMA  240
HVSPTITVHG NDGSYNDATV CVQNSDLGNL DMNFNDMNNV NGVMSDGMSC GSIWPPF*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1129145RRKVSNRNSARRSRRRK
2139146RRSRRRKQ
3141146SRRRKQ
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor. {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapVang05g07970.1
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Repressed by glucose. {ECO:0000269|PubMed:18841482}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150351e-168AP015035.1 Vigna angularis var. angularis DNA, chromosome 2, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_014499771.20.0basic leucine zipper 9
SwissprotQ9FUD31e-50BZIP9_ARATH; Basic leucine zipper 9
TrEMBLA0A1S3U1810.0A0A1S3U181_VIGRR; basic leucine zipper 9
STRINGXP_007137151.11e-162(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF41953458
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G24800.16e-41basic leucine zipper 9
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  2. Ortiz-Espín A, et al.
    Mitochondrial AtTrxo1 is transcriptionally regulated by AtbZIP9 and AtAZF2 and affects seed germination under saline conditions.
    J. Exp. Bot., 2017. 68(5): p. 1025-1038
    [PMID:28184497]
  3. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]
  4. Pedrotti L, et al.
    Snf1-RELATED KINASE1-Controlled C/S1-bZIP Signaling Activates Alternative Mitochondrial Metabolic Pathways to Ensure Plant Survival in Extended Darkness.
    Plant Cell, 2018. 30(2): p. 495-509
    [PMID:29348240]