PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Vang05g03070.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
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Family | bZIP | ||||||||
Protein Properties | Length: 227aa MW: 25053.1 Da PI: 10.2437 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 47.5 | 3.9e-15 | 101 | 147 | 5 | 51 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkelee 51 + r +kNRe+A rsR+RK+a+ + Le++++ L++eN++L+kel+e Vang05g03070.1 101 QHHNRIMKNRESAVRSRARKQAYRKGLEDEIARLTEENSRLRKELKE 147 667799************************************88875 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 2.6E-7 | 95 | 161 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.277 | 99 | 147 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 1.4E-11 | 101 | 147 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14707 | 7.79E-17 | 103 | 148 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 1.3E-12 | 104 | 147 | No hit | No description |
SuperFamily | SSF57959 | 4.74E-10 | 104 | 148 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 105 | 119 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 227 aa Download sequence Send to blast |
MASSSPCDCW PHLSHSLSSP SPSSPSSSSL SQTLLPPPPP SVEHVWNDLK LSSLSNSPVD 60 FNHSSSHSSL LSLSPSHNHH SLLSLSNASF HSNNNTRHQD QHHNRIMKNR ESAVRSRARK 120 QAYRKGLEDE IARLTEENSR LRKELKENVG KWRHAIRSKH TPKTRYPFRN EDEMMTACVK 180 RKRGTVLAAW LEVLNGAAEV GIATPLDHLS VAEKGIASLS AEKGAI* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Vang05g03070.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AP015035 | 0.0 | AP015035.1 Vigna angularis var. angularis DNA, chromosome 2, almost complete sequence, cultivar: Shumari. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_022636756.1 | 6e-54 | bZIP transcription factor 27 isoform X4 | ||||
TrEMBL | A0A0L9V9C0 | 1e-96 | A0A0L9V9C0_PHAAN; Uncharacterized protein | ||||
STRING | GLYMA04G02420.1 | 1e-43 | (Glycine max) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF16339 | 7 | 9 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G35900.1 | 3e-10 | bZIP family protein |