PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vang05g02410.1
Common NameLR48_Vigan09g026700
Organism
Vigna angularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family bZIP
Protein Properties Length: 146aa    MW: 16818.9 Da    PI: 8.3264
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Vang05g02410.1genomeSNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_145.12.2e-143189563
                    CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1  5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63
                    ++ +rkq+NRe+ArrsR RK+  +e L++ v e+++eN++   ++++ ++++ k ++e+
  Vang05g02410.1 31 RKNKRKQSNRESARRSRMRKRDHLEDLRKQVSEFTKENREIMATIDMTTQHYLKTEAEN 89
                    689***********************************************999887765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003383.2E-152791IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1707.4E-112881No hitNo description
PROSITE profilePS5021710.7032976IPR004827Basic-leucine zipper domain
PfamPF001702.4E-103184IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.19E-113183No hitNo description
CDDcd147021.48E-143282No hitNo description
PROSITE patternPS0003603449IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 146 aa     Download sequence    Send to blast
MASSSGNSSI CTKIQSSSSE GDLQVLTMDE RKNKRKQSNR ESARRSRMRK RDHLEDLRKQ  60
VSEFTKENRE IMATIDMTTQ HYLKTEAENC VLRAQMGELN QRLQSLNDII VDIINTTTSY  120
ERDCYLTSLQ SFSNTVCLNQ PVFQW*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14351RRSRMRKRD
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that binds to the DNA G-box motif 5'-CACGTG-3' of MAN7 promoter. Involved in the positive regulation of seed germination through MAN7 gene activation. MAN7 is required for both, loosening of the micropylar endosperm, and rupture of the seed coat in germinating seeds. {ECO:0000269|PubMed:23461773}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapVang05g02410.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150350.0AP015035.1 Vigna angularis var. angularis DNA, chromosome 2, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017435183.11e-104PREDICTED: bZIP transcription factor 44-like
SwissprotC0Z2L52e-35BZP44_ARATH; bZIP transcription factor 44
TrEMBLA0A0L9V9D81e-102A0A0L9V9D8_PHAAN; Uncharacterized protein
TrEMBLA0A0S3RB411e-102A0A0S3RB41_PHAAN; Uncharacterized protein
STRINGXP_007136637.15e-86(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2014845
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75390.12e-20basic leucine-zipper 44
Publications ? help Back to Top
  1. Yang K, et al.
    Genome sequencing of adzuki bean (Vigna angularis) provides insight into high starch and low fat accumulation and domestication.
    Proc. Natl. Acad. Sci. U.S.A., 2015. 112(43): p. 13213-8
    [PMID:26460024]
  2. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]
  3. Pedrotti L, et al.
    Snf1-RELATED KINASE1-Controlled C/S1-bZIP Signaling Activates Alternative Mitochondrial Metabolic Pathways to Ensure Plant Survival in Extended Darkness.
    Plant Cell, 2018. 30(2): p. 495-509
    [PMID:29348240]