PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vang04g13910.2
Organism
Vigna angularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family bZIP
Protein Properties Length: 489aa    MW: 54135 Da    PI: 9.4571
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Vang04g13910.2genomeSNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1301.2e-09176218345
                     XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45 
                     + k  rr+++NReAAr+sR+RKka++++Le    +L++  ++L
  Vang04g13910.2 176 DQKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQEL 218
                     568899************************9777777666555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.4E-7169221No hitNo description
PfamPF077167.1E-7174220IPR004827Basic-leucine zipper domain
SMARTSM003381.8E-7174237IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.415176220IPR004827Basic-leucine zipper domain
CDDcd147086.84E-22178230No hitNo description
SuperFamilySSF579597.5E-7178221No hitNo description
PROSITE patternPS000360181196IPR004827Basic-leucine zipper domain
PfamPF141443.3E-30286360IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 489 aa     Download sequence    Send to blast
LMGSRSRTVN VTSKDTNKVV NGMPSYAPPL PSSSSMGIEA TNVHPSRISE FGTLEQSLGF  60
RVEDTINLSR NPVFSQMKSN SQALGADIQF GALNKVQSII TSDINLSAAI AGSQTLALQK  120
DTQPNLASTS GHRENWGETN MADASPRTDT STDDTEDKNQ LPERGESSDR SKDKSDQKTL  180
RRLAQNREAA RKSRLRKKAY VQQLESSRLK LTQLEQELQR ARQQGIFISS TGDQAQSMSG  240
NGCHCRVLPK FVFLKNPKSI YSTLYTGAMA FDVEYARWLE EHNRQTNELR AAINSHAGDI  300
ELRTIVDNFM AQFDDIFRLK GIAAKADVFH ILSGMWKTPA ERCFMWIGGF RSSELLKLLV  360
SQLEPLTEQQ LMGIYNLQQS SQQAEDALSQ GMDALQQSLS ETLANGSPNS SGSSGNVANY  420
MGQMAMAMGK LGTLEGFLRQ ADNLRQQTLQ QMLRILTTRQ SARALLAISD YFSRLRALSS  480
LWLARPRE*
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription.
Cis-element ? help Back to Top
SourceLink
PlantRegMapVang04g13910.2
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAF4026090.0AF402609.1 Phaseolus vulgaris TGA-type basic leucine zipper protein TGA2.2 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_027923016.10.0transcription factor TGA2.3-like isoform X1
RefseqXP_027923022.10.0transcription factor TGA2.3-like isoform X1
SwissprotO241600.0TGA21_TOBAC; TGACG-sequence-specific DNA-binding protein TGA-2.1
TrEMBLA0A4D6M9H50.0A0A4D6M9H5_VIGUN; Transcription factor TGA
STRINGXP_007162093.10.0(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF14703494
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G12250.21e-136TGACG motif-binding factor 6