PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vang04g10180.1
Organism
Vigna angularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family bZIP
Protein Properties Length: 120aa    MW: 13506.5 Da    PI: 11.88
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Vang04g10180.1genomeSNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_143.19.1e-1470113548
                     CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke 48 
                     ++ +r+ +NRe+ArrsR RK++ ++ L + v++L +eNk+   +
  Vang04g10180.1  70 RKRKRMTSNRESARRSRMRKQKHLDDLVTQVAQLRKENKQILTT 113
                     6789999*******************************987655 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1703.4E-1259114No hitNo description
SMARTSM003381.7E-866119IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.43868119IPR004827Basic-leucine zipper domain
PfamPF001703.8E-1170113IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.13E-1170117No hitNo description
CDDcd147026.93E-1871119No hitNo description
PROSITE patternPS0003607388IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 120 aa     Download sequence    Send to blast
MAAITHHRTF PLYNRTCIKT RPAKKNPTIT NRALLGVGPM ASSSRTCSGS SSLLQNSGSE  60
EDLQPVMDQR KRKRMTSNRE SARRSRMRKQ KHLDDLVTQV AQLRKENKQI LTTVNITTQ*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
16990RKRKRMTSNRESARRSRMRKQK
28289RRSRMRKQ
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that binds to the DNA G-box motif 5'-CACGTG-3' of MAN7 promoter. Involved in the positive regulation of seed germination through MAN7 gene activation. MAN7 is required for both, loosening of the micropylar endosperm, and rupture of the seed coat in germinating seeds. {ECO:0000269|PubMed:23461773}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapVang04g10180.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150370.0AP015037.1 Vigna angularis var. angularis DNA, chromosome 4, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017418036.13e-50PREDICTED: bZIP transcription factor 44-like
SwissprotC0Z2L54e-24BZP44_ARATH; bZIP transcription factor 44
TrEMBLA0A0L9VK413e-60A0A0L9VK41_PHAAN; Uncharacterized protein
STRINGGLYMA12G04440.14e-36(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF61334147
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75390.28e-22basic leucine-zipper 44
Publications ? help Back to Top
  1. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]
  2. Pedrotti L, et al.
    Snf1-RELATED KINASE1-Controlled C/S1-bZIP Signaling Activates Alternative Mitochondrial Metabolic Pathways to Ensure Plant Survival in Extended Darkness.
    Plant Cell, 2018. 30(2): p. 495-509
    [PMID:29348240]