PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Vang04g09350.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
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Family | G2-like | ||||||||
Protein Properties | Length: 206aa MW: 23123 Da PI: 9.8083 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 37.5 | 5.1e-12 | 13 | 38 | 1 | 26 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsek 26 k+rlrWt+eLH+rFv av++LGG+++ Vang04g09350.1 13 KERLRWTQELHDRFVVAVNRLGGPDR 38 68**********************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.10.10.60 | 1.5E-9 | 11 | 39 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 1.7E-7 | 13 | 38 | IPR006447 | Myb domain, plants |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 206 aa Download sequence Send to blast |
MGSSRSRASA TAKERLRWTQ ELHDRFVVAV NRLGGPDRKG NTKRYIERNE DYGYFRAKHL 60 SCQKPLAVEH GFVQKYRISK LIPESSTRGK VEKRSISDIL PNFSSISLGQ SSEMKTRTGK 120 ACKAFDSSTT APLPSLSEES ESLKSQSEKE HESVKKQRIS EEGVFPLSFE HASSTPPEFY 180 NQTWNLPWSQ LAAACLSTLD PSFIF* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Vang04g09350.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AP015037 | 1e-166 | AP015037.1 Vigna angularis var. angularis DNA, chromosome 4, almost complete sequence, cultivar: Shumari. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_017418144.1 | 1e-109 | PREDICTED: myb family transcription factor PHL7-like | ||||
TrEMBL | A0A0L9U3Z6 | 1e-108 | A0A0L9U3Z6_PHAAN; Uncharacterized protein | ||||
STRING | XP_007140328.1 | 2e-84 | (Phaseolus vulgaris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF10659 | 25 | 35 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G06800.2 | 7e-14 | G2-like family protein |