PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Vang04g03040.5 | ||||||||
Common Name | LR48_Vigan01g288700 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
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Family | bZIP | ||||||||
Protein Properties | Length: 78aa MW: 9538.2 Da PI: 12.1806 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 23.7 | 1.1e-07 | 1 | 55 | 10 | 64 |
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC CS bZIP_1 10 kqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkseve 64 +++N +Arrs RK+ +e L++ + + eN++Lk+ + l ++ +l++e++ Vang04g03040.5 1 MISNMDSARRSHMRKQRHLEILQNQMNLFRVENRKLKNGFQFLVHHCNRLRTENK 55 68999*********************************************99985 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 1.5E-5 | 1 | 51 | No hit | No description |
SuperFamily | SSF57959 | 3.21E-7 | 1 | 48 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 78 aa Download sequence Send to blast |
MISNMDSARR SHMRKQRHLE ILQNQMNLFR VENRKLKNGF QFLVHHCNRL RTENKWLRSK 60 QTMLRQKLAD INQIFLF* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Vang04g03040.5 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AP015037 | 1e-128 | AP015037.1 Vigna angularis var. angularis DNA, chromosome 4, almost complete sequence, cultivar: Shumari. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_014520495.1 | 1e-40 | bZIP transcription factor 53-like | ||||
Refseq | XP_017427037.1 | 1e-40 | PREDICTED: bZIP transcription factor 53-like | ||||
TrEMBL | A0A0L9TS55 | 3e-46 | A0A0L9TS55_PHAAN; Uncharacterized protein | ||||
STRING | GLYMA11G04920.2 | 2e-35 | (Glycine max) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G49760.1 | 1e-14 | basic leucine-zipper 5 |
Publications ? help Back to Top | |||
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