PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vang04g03040.4
Common NameLR48_Vigan01g288700
Organism
Vigna angularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family bZIP
Protein Properties Length: 86aa    MW: 10597.4 Da    PI: 12.087
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Vang04g03040.4genomeSNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_126.51.4e-08463564
                    CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC CS
          bZIP_1  5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkseve 64
                    ++  r+++N  +Arrs  RK+  +e L++ +  +  eN++Lk+  + l  ++ +l++e++
  Vang04g03040.4  4 QKRTRMISNMDSARRSHMRKQRHLEILQNQMNLFRVENRKLKNGFQFLVHHCNRLRTENK 63
                    56789**************************************************99985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.8E-6164IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1702.3E-7259No hitNo description
PfamPF001708.9E-7463IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.57E-8556No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 86 aa     Download sequence    Send to blast
MEEQKRTRMI SNMDSARRSH MRKQRHLEIL QNQMNLFRVE NRKLKNGFQF LVHHCNRLRT  60
ENKWLRSKQT MLRQKLADIN QIFLF*
Cis-element ? help Back to Top
SourceLink
PlantRegMapVang04g03040.4
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150371e-142AP015037.1 Vigna angularis var. angularis DNA, chromosome 4, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_014520495.11e-44bZIP transcription factor 53-like
TrEMBLA0A0L9TS555e-52A0A0L9TS55_PHAAN; Uncharacterized protein
STRINGGLYMA11G04920.23e-39(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G49760.12e-16basic leucine-zipper 5
Publications ? help Back to Top
  1. Yang K, et al.
    Genome sequencing of adzuki bean (Vigna angularis) provides insight into high starch and low fat accumulation and domestication.
    Proc. Natl. Acad. Sci. U.S.A., 2015. 112(43): p. 13213-8
    [PMID:26460024]