PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vang0460s00080.1
Organism
Vigna angularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family NAC
Protein Properties Length: 351aa    MW: 38879.5 Da    PI: 9.7258
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Vang0460s00080.1genomeSNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM51.92.5e-169915854128
               NAM  54 eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                       ++ ewyfF +rd+ky+ + r+nrat  gyWk+tgkd++v               +y+grap+g +tdWvmhey l
  Vang0460s00080.1  99 RDIEWYFFGPRDRKYPIEFRTNRATPPGYWKSTGKDTKV---------------YYRGRAPQGIRTDWVMHEYCL 158
                       5569*******************************8766...............789****************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF023655.3E-997158IPR003441NAC domain
SuperFamilySSF1019411.44E-2297165IPR003441NAC domain
Gene3DG3DSA:3.10.180.101.1E-5168218IPR029068Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 351 aa     Download sequence    Send to blast
MTFENQSTNL PKLSGPMGTT DITNLSSVSY DPFLHLNLQA PPPALGNDFA FGGGGVIQGS  60
GIAYQDFGNG VVEFTQDVGK KRGGKRTNQF TKKSFLPSRD IEWYFFGPRD RKYPIEFRTN  120
RATPPGYWKS TGKDTKVYYR GRAPQGIRTD WVMHEYCLDD KECEDTTGLQ CESMGPMEKK  180
LEVMEIEYAR GTVKEGGIKV DQLFFHDPDG FMIEICNCDI LHVIPLPSNM VAQTNLTISI  240
ASKREKSSSE RVVVVIAAAR NRNRRSITAP LPLAVAILIC LHRTTARLRS RGNPQIKFVH  300
KPSSPSSPTS CLKPCEAKTR TAAGAPRETS SCHRQSALKA TLTTKFKHVL *
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A7e-169615860140Stress-induced transcription factor NAC1
Cis-element ? help Back to Top
SourceLink
PlantRegMapVang0460s00080.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150421e-151AP015042.1 Vigna angularis var. angularis DNA, chromosome 9, almost complete sequence, cultivar: Shumari.
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G17730.13e-38NAC domain containing protein 57