PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Vang03g18340.1

Organism

Vigna angularis

Taxonomic ID

3914

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna

Family

bZIP

Protein Properties

Length: 364aa MW: 40758.9 Da PI: 10.0871

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Vang03g18340.1	genome	SNU	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	20.1	1.4e-06	239	262	5	28
CHHHCHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaei 28 +r rrk+kNRe+A rsR+RK+ ++ Vang03g18340.1 239 RRLRRKIKNRESAARSRARKQFRQ 262 6889*****************876 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	1.7E-9	232	292	No hit	No description
SMART	SM00338	3.1E-7	235	309	IPR004827	Basic-leucine zipper domain
CDD	cd14707	4.58E-13	239	303	No hit	No description
PROSITE pattern	PS00036	0	242	257	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 364 aa Download sequence Send to blast
MNVCHLPIPQ NSESLRRGSV GILKKVGNLF REKLWSGVFD WDTMGSQGNG QQSHLQSSSL 60 SRQGSWYNLT LDEVNSQLGD LGKPLGSMNL DELLQNVWTA EASKSSVIGA DSENISSSSS 120 LQRQASLTLA RALSGKTVDD VWREIQQGQK KRYGGEVKTQ EGEMTFGETT LEDFLVQAGL 180 FAEASISPAV GLDTMDFSAA QGFQQKTGLS SSPSIGSLSD TRPGRKRDAP DAYEKTLERR 240 LRRKIKNRES AARSRARKQF RQYQPFMVQA YHNELVGKVS RLEEENVKLK KEKNLNLLRL 300 RAKCYFNTKL SERGPFFVEY SRNRAGGGCR ALKIPVKEFE ERFTPDPLPE PKYQLQRHNS 360 APF*

Sequence ? help Back to Top

Protein Sequence Length: 364 aa Download sequence Send to blast

MNVCHLPIPQ NSESLRRGSV GILKKVGNLF REKLWSGVFD WDTMGSQGNG QQSHLQSSSL  60
SRQGSWYNLT LDEVNSQLGD LGKPLGSMNL DELLQNVWTA EASKSSVIGA DSENISSSSS  120
LQRQASLTLA RALSGKTVDD VWREIQQGQK KRYGGEVKTQ EGEMTFGETT LEDFLVQAGL  180
FAEASISPAV GLDTMDFSAA QGFQQKTGLS SSPSIGSLSD TRPGRKRDAP DAYEKTLERR  240
LRRKIKNRES AARSRARKQF RQYQPFMVQA YHNELVGKVS RLEEENVKLK KEKNLNLLRL  300
RAKCYFNTKL SERGPFFVEY SRNRAGGGCR ALKIPVKEFE ERFTPDPLPE PKYQLQRHNS  360
APF*

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Vang03g18340.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	AP015038	0.0	AP015038.1 Vigna angularis var. angularis DNA, chromosome 5, almost complete sequence, cultivar: Shumari.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_022632002.1	1e-159	ABSCISIC ACID-INSENSITIVE 5-like protein 2 isoform X1
TrEMBL	A0A3Q0EP50	1e-158	A0A3Q0EP50_VIGRR; ABSCISIC ACID-INSENSITIVE 5-like protein 2 isoform X1
STRING	GLYMA13G03880.4	1e-152	(Glycine max)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF12464	25	32

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G56850.1	3e-36	ABA-responsive element binding protein 3