PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Vang03g10630.2 | ||||||||
Common Name | LR48_Vigan10g152900 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
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Family | bZIP | ||||||||
Protein Properties | Length: 351aa MW: 38439.1 Da PI: 8.4682 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 32 | 2.6e-10 | 181 | 214 | 3 | 36 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvk 36 + kr rr+ +NRe+ArrsR+RK+a + eLe+ v Vang03g10630.2 181 DAKRVRRMLSNRESARRSRRRKQAHLSELETQVC 214 689***************************9985 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 6.3E-10 | 178 | 246 | No hit | No description |
SMART | SM00338 | 1.0E-10 | 179 | 248 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.186 | 181 | 213 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 7.7E-9 | 182 | 216 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 1.29E-8 | 183 | 219 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 186 | 201 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF12498 | 5.6E-31 | 234 | 343 | IPR020983 | Basic leucine-zipper, C-terminal |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0071215 | Biological Process | cellular response to abscisic acid stimulus | ||||
GO:0071333 | Biological Process | cellular response to glucose stimulus | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0042802 | Molecular Function | identical protein binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding | ||||
GO:0046982 | Molecular Function | protein heterodimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 351 aa Download sequence Send to blast |
MERVLSVDEI SEQYWVAAKK ESCKSKSKMN RSESEWAFQQ FLQEAVSPSS SSSSDVKPKK 60 DPDINMNIPV TLNVDSHDYQ SILKTKLNLA CAAVALTRGS LVKSQNPTTF PDSGSQAAVP 120 SEVGTLKDVE AATGISFSSP SLQKKPAVAM RPTLSASSRE QSDDEEAEEE INMTGKMNTT 180 DAKRVRRMLS NRESARRSRR RKQAHLSELE TQVCMFLYNS AAVDNRVLKA DVETLRAKVK 240 MAEETVKRIS GLNPMFHAMT EMSSMEIAMF DESRSETSGG GAVPVQEDTN HKLSEASSKN 300 GFGGISSVKS VQQKVVGWNK SGGGNSLHRV ASLEHLQKRI RGDEDSRGEQ * |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 195 | 202 | RRSRRRKQ |
2 | 197 | 202 | SRRRKQ |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Binds to the G-box-like motif (5'-ACGTGGC-3') of the chalcone synthase (CHS) gene promoter. G-box and G-box-like motifs are defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control. |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00040 | PBM | Transfer from AT5G28770 | Download |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Vang03g10630.2 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AP015038 | 0.0 | AP015038.1 Vigna angularis var. angularis DNA, chromosome 5, almost complete sequence, cultivar: Shumari. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_017438629.1 | 0.0 | PREDICTED: light-inducible protein CPRF2 isoform X1 | ||||
Swissprot | Q99090 | 1e-73 | CPRF2_PETCR; Light-inducible protein CPRF2 | ||||
TrEMBL | A0A0L9VL60 | 0.0 | A0A0L9VL60_PHAAN; Uncharacterized protein | ||||
TrEMBL | A0A0S3S5A3 | 0.0 | A0A0S3S5A3_PHAAN; Uncharacterized protein | ||||
STRING | XP_007147170.1 | 1e-161 | (Phaseolus vulgaris) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G28770.2 | 5e-50 | bZIP family protein |
Publications ? help Back to Top | |||
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