PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vang03g09900.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family bZIP
Protein Properties Length: 554aa    MW: 60130.7 Da    PI: 6.649
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Vang03g09900.1genomeSNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_171.81e-22407469163
                     XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                     e+elkrerrkq+NRe+ArrsR+RK+ae+eeL++kv++L +eN +Lk+e+++l++ ++k++ e+
  Vang03g09900.1 407 ERELKRERRKQSNRESARRSRLRKQAETEELARKVDSLNSENGTLKSEINRLTESSEKMRVEN 469
                     89*********************************************************9987 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077772.7E-3495190IPR012900G-box binding protein, multifunctional mosaic region
PfamPF165968.7E-17225295No hitNo description
Gene3DG3DSA:1.20.5.1702.6E-16401466No hitNo description
SMARTSM003382.9E-21407471IPR004827Basic-leucine zipper domain
PfamPF001704.9E-20407469IPR004827Basic-leucine zipper domain
PROSITE profilePS5021713.185409472IPR004827Basic-leucine zipper domain
SuperFamilySSF579596.88E-11410465No hitNo description
CDDcd147028.30E-22412460No hitNo description
PROSITE patternPS000360414429IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 554 aa     Download sequence    Send to blast
VDFAFALLPS LLVTTTIPHL CVKAHCCFPR FLERENAHSK LIVSPYLDPF FGYLELPGVF  60
SPCVFMVFLA RCFVGEDNIW PIGYLVSALY LECTMGNNEE EKSTKTEKPS SPATMDQANQ  120
TNQPNIHVYP DWAAMQAYYG QRVTMPPYYN SAVASGHAPH PYMWGPPQPM MPPYGPPYAA  180
IYSHGGVYPA VPIGPHTHSQ GVPSSPAAVT PLSIETPPKS SGNNDQGLMK KLKEFDGLAM  240
SIGNGHAESA ERGGENRLSP SVDTEGSSDG SDDNTSGANQ TRRKRSRGGT PTTGEIAEVF  300
ILAISLVNVV WGIGVSWLQI TIVVEMSYKP KCVILTDGEG KTEIQSSPIS KDTAASNKIV  360
AVAPASVAGT IVGPVVSSGM TTVLELRNPS SVHSKANTTS APQPSNEREL KRERRKQSNR  420
ESARRSRLRK QAETEELARK VDSLNSENGT LKSEINRLTE SSEKMRVENA TLREKLKIAR  480
LGQTQEITLN IIDSERATPV STENLLSRVN NNSSSNDRTM EDENDFCENK PNSGAKLHQL  540
LDTSPRADAV AAG*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1423429RRSRLRK
2423430RRSRLRKQ
Functional Description ? help Back to Top
Source Description
UniProtBinds to the G-box-like motif (5'-ACGTGGC-3') of the chalcone synthase (CHS) gene promoter. G-box and G-box-like motifs are defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control.
Cis-element ? help Back to Top
SourceLink
PlantRegMapVang03g09900.1
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By light.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKT0311450.0KT031145.1 Glycine max clone HN_CCL_210 BZIP transcription factor (Glyma19g44190.2) mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_014491552.10.0common plant regulatory factor 1-like isoform X4
RefseqXP_014491555.10.0common plant regulatory factor 1-like isoform X5
SwissprotQ990891e-124CPRF1_PETCR; Common plant regulatory factor 1
TrEMBLA0A1S3TCP80.0A0A1S3TCP8_VIGRR; common plant regulatory factor 1-like isoform X4
TrEMBLA0A1S3TCR80.0A0A1S3TCR8_VIGRR; common plant regulatory factor 1-like isoform X5
STRINGGLYMA03G41590.50.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF53013455
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46270.12e-78G-box binding factor 3
Publications ? help Back to Top
  1. Weisshaar B,Armstrong GA,Block A,da Costa e Silva O,Hahlbrock K
    Light-inducible and constitutively expressed DNA-binding proteins recognizing a plant promoter element with functional relevance in light responsiveness.
    EMBO J., 1991. 10(7): p. 1777-86
    [PMID:2050115]
  2. Feldbrügge M,Hahlbrock K,Weisshaar B
    The transcriptional regulator CPRF1: expression analysis and gene structure.
    Mol. Gen. Genet., 1996. 251(6): p. 619-27
    [PMID:8757392]