PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vang03g07110.1
Organism
Vigna angularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family ERF
Protein Properties Length: 355aa    MW: 38193.4 Da    PI: 4.9395
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Vang03g07110.1genomeSNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.81.3e-182171256
             AP2  2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkklege 56
                    ++ GVr+++ +grWvAeI+d      ++ r +lg+f+tae+Aa+a+++a+++l+g+
  Vang03g07110.1 21 RFVGVRQRP-SGRWVAEIKD----SlQKVRLWLGTFDTAEDAARAYDNAARALRGA 71
                    689******.7*********....4456*************************995 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.107.0E-292178IPR001471AP2/ERF domain
SMARTSM003803.9E-352184IPR001471AP2/ERF domain
PROSITE profilePS5103220.4952178IPR001471AP2/ERF domain
CDDcd000182.43E-312178No hitNo description
PfamPF008471.8E-122170IPR001471AP2/ERF domain
SuperFamilySSF541716.54E-202278IPR016177DNA-binding domain
PRINTSPR003671.1E-72233IPR001471AP2/ERF domain
PRINTSPR003671.1E-74460IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 355 aa     Download sequence    Send to blast
MGAVNDANRS RKKSSSRGHH RFVGVRQRPS GRWVAEIKDS LQKVRLWLGT FDTAEDAARA  60
YDNAARALRG ANARTNFELP EATSGDASKR GDGGGSTFVP NCSEPFSFED VNEPSEEAEG  120
LLGALKAKLL DGKKGKFHFP FLPNSAASPL VQSGWVSTST QNVCSAEKDL LLPSSASNTV  180
LSSMNGTGAN PLLGVTSTLE TSNTCSKSVV IPNHDHEGSE GRSSRVDSHQ LCQTPPEATW  240
FNEVAYELPW PTQCMSQVPD NNNNSLLASA ATLAWPLSGV IESIDMACPD QGPSNCNKSG  300
QMMNMVSMQL PLVGGATEGL WTLEQQQFVQ YENNSWFSYN GSWDPLLYVP SELA*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A2e-1419771271Ethylene-responsive transcription factor ERF096
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapVang03g07110.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150380.0AP015038.1 Vigna angularis var. angularis DNA, chromosome 5, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017434815.10.0PREDICTED: ethylene-responsive transcription factor ERF119-like
TrEMBLA0A0S3S3140.0A0A0S3S314_PHAAN; Uncharacterized protein
STRINGXP_007148016.10.0(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF113333035
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.12e-13related to AP2 11