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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Vang03g01200.4 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
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| Family |
GRAS |
| Protein Properties |
Length: 428aa MW: 48015.1 Da PI: 6.7766 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Vang03g01200.4 | genome | SNU | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 421.6 | 6.5e-129 | 55 | 425 | 2 | 374 |
GRAS 2 velLlecAeavssgdlelaqalLar.lselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95
+e+L +cA+avs+gd e a ++++ l +++s gdp+qRl ay++e+L+arl +s+s +ykal++++ + s++ +++++++++++P+ kf++
Vang03g01200.4 55 KEVLSRCAQAVSDGDIETAVGFMNNvLPKMVSVGGDPIQRLGAYMLEGLRARLESSGSLIYKALKCEQPA---SKDLMSYMHILYQICPYWKFCY 146
789********************8726788***************************************9...99999***************** PP
GRAS 96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrled 188
+ aN I ea+++e+r+HiiDf+i qG+QW+ L++aLasRp+g+p +R+Tgv+++es+ + l +g+rL+++A++++vpfef+ +a + +
Vang03g01200.4 147 VSANAVIGEAMQNESRIHIIDFQIAQGTQWMLLIHALASRPGGTPFIRVTGVDDSESFhaRGGGLDIVGKRLSEYAKSCRVPFEFHS-AAMSGCE 240
******************************************************9999889999***********************.89999** PP
GRAS 189 leleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseeri 283
+ele+L v pgEalaVn+ + lh+++desvs+e++rd++L+ vk+lsPkvv++veqe+++n+++F++rf+e+l+yysa+f+s+++ lpre+++ri
Vang03g01200.4 241 VELENLVVLPGEALAVNFPFVLHHMPDESVSTENHRDRLLRRVKNLSPKVVTLVEQESNTNTSPFFQRFVETLSYYSAMFESIDVALPREDKQRI 335
*********************************************************************************************** PP
GRAS 284 kvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
+ E+++++r+ivn++aceg er+erhe l+kWr+r+++aGF p pls+++++ ++ +lr+++++ yr+e+ +g+l+lgWk+r+L + SaWr
Vang03g01200.4 336 SAEQHCVARDIVNMIACEGPERVERHELLGKWRSRFSMAGFAPCPLSSSVTNAVRNMLREFNGN-YRLEHIDGALYLGWKRRALCTSSAWR 425
**************************************************************77.*************************8 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 428 aa
Download sequence Send
to blast |
LKHKLRELEI SLLGPDSEIV DSCHCCYEGG HHGASPMAKY NWDQVVEMIP KLDLKEVLSR 60
CAQAVSDGDI ETAVGFMNNV LPKMVSVGGD PIQRLGAYML EGLRARLESS GSLIYKALKC 120
EQPASKDLMS YMHILYQICP YWKFCYVSAN AVIGEAMQNE SRIHIIDFQI AQGTQWMLLI 180
HALASRPGGT PFIRVTGVDD SESFHARGGG LDIVGKRLSE YAKSCRVPFE FHSAAMSGCE 240
VELENLVVLP GEALAVNFPF VLHHMPDESV STENHRDRLL RRVKNLSPKV VTLVEQESNT 300
NTSPFFQRFV ETLSYYSAMF ESIDVALPRE DKQRISAEQH CVARDIVNMI ACEGPERVER 360
HELLGKWRSR FSMAGFAPCP LSSSVTNAVR NMLREFNGNY RLEHIDGALY LGWKRRALCT 420
SSAWRCY*
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| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcription factor that acts as a positive regulator of continuous red light signals downstream of phytochrome B (phyB). Required for the regulation of hypocotyl elongation during de-etiolation. May be required to modulate phytochrome A (phyA) signal transduction in a phyB-independent way. {ECO:0000269|PubMed:16680434}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: By osmotic and cold stresses, and UV-A/B. {ECO:0000269|PubMed:16680434}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AP015038 | 0.0 | AP015038.1 Vigna angularis var. angularis DNA, chromosome 5, almost complete sequence, cultivar: Shumari. |
