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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Vang03g01200.3 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
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| Family |
GRAS |
| Protein Properties |
Length: 523aa MW: 58298.7 Da PI: 6.1991 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Vang03g01200.3 | genome | SNU | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 420.7 | 1.3e-128 | 150 | 520 | 2 | 374 |
GRAS 2 velLlecAeavssgdlelaqalLar.lselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95
+e+L +cA+avs+gd e a ++++ l +++s gdp+qRl ay++e+L+arl +s+s +ykal++++ + s++ +++++++++++P+ kf++
Vang03g01200.3 150 KEVLSRCAQAVSDGDIETAVGFMNNvLPKMVSVGGDPIQRLGAYMLEGLRARLESSGSLIYKALKCEQPA---SKDLMSYMHILYQICPYWKFCY 241
789********************8726788***************************************9...99999***************** PP
GRAS 96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrled 188
+ aN I ea+++e+r+HiiDf+i qG+QW+ L++aLasRp+g+p +R+Tgv+++es+ + l +g+rL+++A++++vpfef+ +a + +
Vang03g01200.3 242 VSANAVIGEAMQNESRIHIIDFQIAQGTQWMLLIHALASRPGGTPFIRVTGVDDSESFhaRGGGLDIVGKRLSEYAKSCRVPFEFHS-AAMSGCE 335
******************************************************9999889999***********************.89999** PP
GRAS 189 leleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseeri 283
+ele+L v pgEalaVn+ + lh+++desvs+e++rd++L+ vk+lsPkvv++veqe+++n+++F++rf+e+l+yysa+f+s+++ lpre+++ri
Vang03g01200.3 336 VELENLVVLPGEALAVNFPFVLHHMPDESVSTENHRDRLLRRVKNLSPKVVTLVEQESNTNTSPFFQRFVETLSYYSAMFESIDVALPREDKQRI 430
*********************************************************************************************** PP
GRAS 284 kvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
+ E+++++r+ivn++aceg er+erhe l+kWr+r+++aGF p pls+++++ ++ +lr+++++ yr+e+ +g+l+lgWk+r+L + SaWr
Vang03g01200.3 431 SAEQHCVARDIVNMIACEGPERVERHELLGKWRSRFSMAGFAPCPLSSSVTNAVRNMLREFNGN-YRLEHIDGALYLGWKRRALCTSSAWR 520
**************************************************************77.*************************8 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 523 aa
Download sequence Send
to blast |
LQSNSCHEIH DSNSQGTTIS FEPCKEQYFT LESSPALNDL IGCDSPSYAS VSSNSNRSPF 60
SPHASHSYHS DQHQSSDNNY GSPTSAHSSA DDSYELKHKL RELEISLLGP DSEIVDSCHC 120
CYEGGHHGAS PMAKYNWDQV VEMIPKLDLK EVLSRCAQAV SDGDIETAVG FMNNVLPKMV 180
SVGGDPIQRL GAYMLEGLRA RLESSGSLIY KALKCEQPAS KDLMSYMHIL YQICPYWKFC 240
YVSANAVIGE AMQNESRIHI IDFQIAQGTQ WMLLIHALAS RPGGTPFIRV TGVDDSESFH 300
ARGGGLDIVG KRLSEYAKSC RVPFEFHSAA MSGCEVELEN LVVLPGEALA VNFPFVLHHM 360
PDESVSTENH RDRLLRRVKN LSPKVVTLVE QESNTNTSPF FQRFVETLSY YSAMFESIDV 420
ALPREDKQRI SAEQHCVARD IVNMIACEGP ERVERHELLG KWRSRFSMAG FAPCPLSSSV 480
TNAVRNMLRE FNGNYRLEHI DGALYLGWKR RALCTSSAWR CY*
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| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcription factor that acts as a positive regulator of continuous red light signals downstream of phytochrome B (phyB). Required for the regulation of hypocotyl elongation during de-etiolation. May be required to modulate phytochrome A (phyA) signal transduction in a phyB-independent way. {ECO:0000269|PubMed:16680434}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: By osmotic and cold stresses, and UV-A/B. {ECO:0000269|PubMed:16680434}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AP015038 | 0.0 | AP015038.1 Vigna angularis var. angularis DNA, chromosome 5, almost complete sequence, cultivar: Shumari. |
