PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Vang0364s00190.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
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Family | bZIP | ||||||||
Protein Properties | Length: 644aa MW: 73666 Da PI: 8.8237 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 31.2 | 4.8e-10 | 66 | 96 | 4 | 34 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeek 34 k rr+++NReAAr+sR+RKka++++Le Vang0364s00190.2 66 NKMRRRLAQNREAARKSRLRKKAYVKQLESS 96 57889***********************975 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 4.1E-4 | 62 | 123 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 8.611 | 65 | 100 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 2.7E-7 | 66 | 100 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 1.4E-7 | 67 | 103 | No hit | No description |
SuperFamily | SSF57959 | 2.81E-6 | 67 | 100 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 70 | 85 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF14144 | 8.8E-26 | 156 | 229 | IPR025422 | Transcription factor TGA like domain |
SuperFamily | SSF46565 | 1.44E-21 | 385 | 517 | IPR001623 | DnaJ domain |
Gene3D | G3DSA:1.10.287.110 | 1.2E-19 | 444 | 519 | IPR001623 | DnaJ domain |
SMART | SM00271 | 5.8E-15 | 449 | 513 | IPR001623 | DnaJ domain |
PROSITE profile | PS50076 | 16.249 | 450 | 521 | IPR001623 | DnaJ domain |
CDD | cd06257 | 1.10E-13 | 451 | 510 | IPR001623 | DnaJ domain |
Pfam | PF00226 | 3.8E-17 | 451 | 518 | IPR001623 | DnaJ domain |
PRINTS | PR00625 | 1.1E-12 | 452 | 470 | IPR001623 | DnaJ domain |
PRINTS | PR00625 | 1.1E-12 | 470 | 485 | IPR001623 | DnaJ domain |
PRINTS | PR00625 | 1.1E-12 | 493 | 513 | IPR001623 | DnaJ domain |
PROSITE pattern | PS00636 | 0 | 498 | 517 | IPR018253 | DnaJ domain, conserved site |
PRINTS | PR00625 | 1.1E-12 | 539 | 558 | IPR001623 | DnaJ domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0009507 | Cellular Component | chloroplast | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 644 aa Download sequence Send to blast |
MKMDIYEPFQ QVGMWGDAFK VDGGLNSIAS PILMVDTNVE TQSEYIPQES REPSGADQET 60 TDKDANKMRR RLAQNREAAR KSRLRKKAYV KQLESSRMKL VQLELEIGKA RKQGLYMGTA 120 LDASYIGSTS ETINPVIVAF EIEYGQWVEE QHRRNEELRH AFQTQAPDVQ LNAVVQSVLN 180 HYSNLFRMKA DAAKADVLYL LSGVWKASVE RIFLWIGGSR PSQLLNIIVP QLEPLTDQQI 240 VGIKNLRQSS QQAEDALSQG LEKLQQSLVL DMAVDPLGVG NFGLQMALAI DKFEALEGFV 300 SQFSIENFRQ ITLDNKLCFT CHAYSQLIKL LVACWLLGNT FTVFALFALF GILVHVNFPS 360 FLKGRNIEEF QKSGETMSNL RTLCRPQTVF SFISCRHQFR SISFPNPNCK PRLPSPFLYS 420 TIGSWGSNPW FRVNQRRTVA KASNWAEQKS PYETLELEGD ADEERIKIAY RRLAKFYHPD 480 VYDGRGNLEE GETAEARFIK IQAAYELLID GESRRQYDID NRVNPMKASQ AWMEWLIKKR 540 KAFDQRGDMA IAAWAEQQQR ELNLRVRQLS RSKTDPDEAR RILAREKKAS ADYYSNTLKR 600 HTLVLKKRDL MRRKAEEEKK KTISRLLAAE GLELDDSDSD EAL* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Vang0364s00190.2 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | BT146642 | 0.0 | BT146642.1 Lotus japonicus clone JCVI-FLLj-8M13 unknown mRNA. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A371FDF4 | 0.0 | A0A371FDF4_MUCPR; Transcription factor TGA3 (Fragment) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G10030.2 | 1e-101 | TGACG motif-binding factor 4 |