PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vang0346s00010.1
Organism
Vigna angularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family NAC
Protein Properties Length: 114aa    MW: 13110.9 Da    PI: 9.0443
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Vang0346s00010.1genomeSNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM33.71.1e-105611049103
               NAM  49 kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglk 103
                       +++++++ ewy F +rd ky+++  + +at +gyWk tgkd +v+ k++   g k
  Vang0346s00010.1  56 AAIRSRDPEWYCFGPRDWKYPNEFTTIKATPAGYWKCTGKDSKVYYKGTPPHGAK 110
                       46677888*************************************9877666665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003802.8E-4441IPR001471AP2/ERF domain
SuperFamilySSF541711.57E-7837IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.101.0E-7836IPR001471AP2/ERF domain
PROSITE profilePS510329.058835IPR001471AP2/ERF domain
SuperFamilySSF1019413.53E-1255109IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 114 aa     Download sequence    Send to blast
MLNRPCGYDK EEKAARAYDL AALKYWGTST TTNFPISNYD KELDEMKHIT RQEFVAAIRS  60
RDPEWYCFGP RDWKYPNEFT TIKATPAGYW KCTGKDSKVY YKGTPPHGAK LIV*
Cis-element ? help Back to Top
SourceLink
PlantRegMapVang0346s00010.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150343e-84AP015034.1 Vigna angularis var. angularis DNA, chromosome 1, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_022148736.11e-28AP2-like ethylene-responsive transcription factor PLT2, partial
TrEMBLA0A151TVR79e-27A0A151TVR7_CAJCA; AP2-like ethylene-responsive transcription factor PLT2
TrEMBLG9FSH67e-27G9FSH6_ELAGV; Putative APETALA2 ethylene responsive element binding protein (Fragment)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF49423152
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G20840.12e-27AP2 family protein