PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Vang0326s00020.7

Common Name

LR48_Vigan05g112000

Organism

Vigna angularis

Taxonomic ID

3914

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna

Family

bZIP

Protein Properties

Length: 156aa MW: 17869.4 Da PI: 10.5817

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Vang0326s00020.7	genome	SNU	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	34.5	4.5e-11	8	49	9	50
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 9 rkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50 r NR +A+rsR RK+++i eLe+ v +L++e +aL ++ Vang0326s00020.7 8 RILANRQSAQRSRVRKLQYISELERSVTTLQTEVSALSPRVA 49 6778*****************************999987765 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	1.7E-7	2	64	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	9.14E-11	7	58	No hit	No description
Pfam	PF00170	7.8E-9	8	49	IPR004827	Basic-leucine zipper domain
PROSITE pattern	PS00036	0	8	22	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	4.0E-13	8	55	No hit	No description
CDD	cd14703	9.80E-18	8	55	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 156 aa Download sequence Send to blast
LLLCMHIRIL ANRQSAQRSR VRKLQYISEL ERSVTTLQTE VSALSPRVAF LDHQRLILNV 60 DNSALKQRIA ALAQDKIFKD AHQEALKKEI ERLRQIYHQQ NLQKMSNTLN NNLQNPSTSQ 120 PQATIQSHSL HQHQHQQQIA VSQPLGCKDK EQLLS*

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator. {ECO:0000269\|PubMed:17719007}.

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Vang0326s00020.7

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	AP015040	1e-124	AP015040.1 Vigna angularis var. angularis DNA, chromosome 7, almost complete sequence, cultivar: Shumari.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_017424225.1	1e-101	PREDICTED: basic leucine zipper 34-like
Swissprot	Q9M2K4	2e-59	BZP61_ARATH; Basic leucine zipper 61
TrEMBL	A0A0L9ULF3	1e-100	A0A0L9ULF3_PHAAN; Uncharacterized protein
TrEMBL	A0A0S3SIF7	1e-99	A0A0S3SIF7_PHAAN; Uncharacterized protein
STRING	XP_007149416.1	4e-80	(Phaseolus vulgaris)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G58120.1	9e-62	bZIP family protein

Publications ? help Back to Top
Ding Y, et al. Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] Yang K, et al. Genome sequencing of adzuki bean (Vigna angularis) provides insight into high starch and low fat accumulation and domestication. Proc. Natl. Acad. Sci. U.S.A., 2015. 112(43): p. 13213-8 [PMID:26460024] Gibalová A, et al. Characterization of pollen-expressed bZIP protein interactions and the role of ATbZIP18 in the male gametophyte. Plant Reprod, 2017. 30(1): p. 1-17 [PMID:27896439] Ezer D, et al. The G-Box Transcriptional Regulatory Code in Arabidopsis. Plant Physiol., 2017. 175(2): p. 628-640 [PMID:28864470]