PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Vang0326s00020.2 | ||||||||
Common Name | LR48_Vigan05g112000 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
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Family | bZIP | ||||||||
Protein Properties | Length: 235aa MW: 26116.4 Da PI: 9.1687 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 35.8 | 1.8e-11 | 83 | 128 | 5 | 50 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50 kr +r NR +A+rsR RK+++i eLe+ v +L++e +aL ++ Vang0326s00020.2 83 KRVKRILANRQSAQRSRVRKLQYISELERSVTTLQTEVSALSPRVA 128 8999*********************************999987765 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 2.2E-14 | 79 | 143 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.703 | 81 | 133 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 4.3E-10 | 83 | 127 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 7.8E-12 | 83 | 137 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 2.8E-14 | 83 | 134 | No hit | No description |
CDD | cd14703 | 7.28E-20 | 84 | 134 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 86 | 101 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 235 aa Download sequence Send to blast |
LISMFSDDIS AAALPPPPLS SASNPSSPSS DQNSNNEEKP MAMTLDLKPK TEKVEEESSC 60 KNEAAALQLS ATTTSPETVV DPKRVKRILA NRQSAQRSRV RKLQYISELE RSVTTLQTEV 120 SALSPRVAFL DHQRLILNVD NSALKQRIAA LAQDKIFKDA HQEALKKEIE RLRQIYHQQN 180 LQKMSNTLNN NLQNPSTSQP QATIQSHSLH QHQHQQQIAV SQPLGCKDKE QLLS* |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator. {ECO:0000269|PubMed:17719007}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Vang0326s00020.2 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AP015040 | 1e-143 | AP015040.1 Vigna angularis var. angularis DNA, chromosome 7, almost complete sequence, cultivar: Shumari. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_017424225.1 | 1e-167 | PREDICTED: basic leucine zipper 34-like | ||||
Swissprot | Q9M2K4 | 4e-67 | BZP61_ARATH; Basic leucine zipper 61 | ||||
TrEMBL | A0A0L9ULF3 | 1e-166 | A0A0L9ULF3_PHAAN; Uncharacterized protein | ||||
STRING | XP_007149416.1 | 1e-121 | (Phaseolus vulgaris) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G58120.1 | 1e-65 | bZIP family protein |
Publications ? help Back to Top | |||
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