PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Vang0326s00020.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
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Family | bZIP | ||||||||
Protein Properties | Length: 295aa MW: 32851.8 Da PI: 8.2919 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 33.1 | 1.2e-10 | 146 | 188 | 8 | 50 |
HCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 8 rrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50 +r NR +A+rsR RK+++i eLe+ v +L++e +aL ++ Vang0326s00020.1 146 IRILANRQSAQRSRVRKLQYISELERSVTTLQTEVSALSPRVA 188 57778*****************************999987765 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 7.6E-9 | 136 | 203 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 2.95E-10 | 146 | 197 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 1.2E-12 | 147 | 194 | No hit | No description |
CDD | cd14703 | 3.94E-20 | 147 | 194 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 147 | 161 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 2.2E-8 | 147 | 187 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 295 aa Download sequence Send to blast |
MAQLPPKIPT IPQNWPSFSH QRVPTMANFT PTTSSTTTTT VAAAATTTAP SQPLWVDEFL 60 DFSSTRRGAH RRSASDSIAF LETPFLEECR AGFDRLDEDQ LISMFSDDIS AAALPPPPLS 120 SASNPSSPSS DQNSNNEEKP MAMTHIRILA NRQSAQRSRV RKLQYISELE RSVTTLQTEV 180 SALSPRVAFL DHQRLILNVD NSALKQRIAA LAQDKIFKDA HQEALKKEIE RLRQIYHQQN 240 LQKMSNTLNN NLQNPSTSQP QATIQSHSLH QHQHQQQIAV SQPLGCKDKE QLLS* |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator involved in the sporophytic control of cell wall patterning and gametophytic control of pollen development. May play a role in the control of metabolic pathways regulating cellular transport and lipid metabolism. {ECO:0000269|PubMed:17719007, ECO:0000269|PubMed:19449183}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Vang0326s00020.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AP015040 | 0.0 | AP015040.1 Vigna angularis var. angularis DNA, chromosome 7, almost complete sequence, cultivar: Shumari. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_017424225.1 | 1e-158 | PREDICTED: basic leucine zipper 34-like | ||||
Swissprot | F4IN23 | 8e-80 | BZP34_ARATH; Basic leucine zipper 34 | ||||
TrEMBL | A0A0S3SIF7 | 1e-156 | A0A0S3SIF7_PHAAN; Uncharacterized protein | ||||
STRING | XP_007149416.1 | 1e-146 | (Phaseolus vulgaris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF2011 | 34 | 88 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G58120.1 | 1e-58 | bZIP family protein |
Publications ? help Back to Top | |||
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