PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vang0326s00020.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family bZIP
Protein Properties Length: 295aa    MW: 32851.8 Da    PI: 8.2919
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Vang0326s00020.1genomeSNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_133.11.2e-10146188850
                       HCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
            bZIP_1   8 rrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50 
                       +r   NR +A+rsR RK+++i eLe+ v +L++e +aL  ++ 
  Vang0326s00020.1 146 IRILANRQSAQRSRVRKLQYISELERSVTTLQTEVSALSPRVA 188
                       57778*****************************999987765 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003387.6E-9136203IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.95E-10146197No hitNo description
Gene3DG3DSA:1.20.5.1701.2E-12147194No hitNo description
CDDcd147033.94E-20147194No hitNo description
PROSITE patternPS000360147161IPR004827Basic-leucine zipper domain
PfamPF001702.2E-8147187IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 295 aa     Download sequence    Send to blast
MAQLPPKIPT IPQNWPSFSH QRVPTMANFT PTTSSTTTTT VAAAATTTAP SQPLWVDEFL  60
DFSSTRRGAH RRSASDSIAF LETPFLEECR AGFDRLDEDQ LISMFSDDIS AAALPPPPLS  120
SASNPSSPSS DQNSNNEEKP MAMTHIRILA NRQSAQRSRV RKLQYISELE RSVTTLQTEV  180
SALSPRVAFL DHQRLILNVD NSALKQRIAA LAQDKIFKDA HQEALKKEIE RLRQIYHQQN  240
LQKMSNTLNN NLQNPSTSQP QATIQSHSLH QHQHQQQIAV SQPLGCKDKE QLLS*
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator involved in the sporophytic control of cell wall patterning and gametophytic control of pollen development. May play a role in the control of metabolic pathways regulating cellular transport and lipid metabolism. {ECO:0000269|PubMed:17719007, ECO:0000269|PubMed:19449183}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapVang0326s00020.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150400.0AP015040.1 Vigna angularis var. angularis DNA, chromosome 7, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017424225.11e-158PREDICTED: basic leucine zipper 34-like
SwissprotF4IN238e-80BZP34_ARATH; Basic leucine zipper 34
TrEMBLA0A0S3SIF71e-156A0A0S3SIF7_PHAAN; Uncharacterized protein
STRINGXP_007149416.11e-146(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF20113488
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58120.11e-58bZIP family protein
Publications ? help Back to Top
  1. Jiang J,Zhang Z,Cao J
    Pollen wall development: the associated enzymes and metabolic pathways.
    Plant Biol (Stuttg), 2013. 15(2): p. 249-63
    [PMID:23252839]
  2. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  3. Gibalová A, et al.
    Characterization of pollen-expressed bZIP protein interactions and the role of ATbZIP18 in the male gametophyte.
    Plant Reprod, 2017. 30(1): p. 1-17
    [PMID:27896439]
  4. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]