PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vang0304s00210.1
Organism
Vigna angularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family NAC
Protein Properties Length: 144aa    MW: 16136.2 Da    PI: 9.5283
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Vang0304s00210.1genomeSNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM21.85.2e-0714406490
               NAM 64 rdkkyatgkrknratksgyWkatgkdk 90
                       dkky+tg+r+nrat +g+Wkat +d+
  Vang0304s00210.1 14 GDKKYPTGTRTNRATVAGFWKATRRDQ 40
                      689********************9987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019419.55E-111464IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 144 aa     Download sequence    Send to blast
MVRISHQWLT SGRGDKKYPT GTRTNRATVA GFWKATRRDQ GCYGWKTNWI MHEYKHQTSE  60
PYWRIWVLGV GDIMFCTVVI EIARDSDGGG RRNHCSWQRG GGGVDRLMGL QVDSATVEFA  120
LDVSVGEIGK KKEGKKEDEV ASV*
Cis-element ? help Back to Top
SourceLink
PlantRegMapVang0304s00210.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150401e-96AP015040.1 Vigna angularis var. angularis DNA, chromosome 7, almost complete sequence, cultivar: Shumari.
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G62700.19e-16Arabidopsis NAC domain containing protein 26