PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vang02g14650.1
Common NameLR48_Vigan10g253200
Organism
Vigna angularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family NAC
Protein Properties Length: 372aa    MW: 42487.8 Da    PI: 6.7086
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Vang02g14650.1genomeSNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM173.46.8e-54141402128
             NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 
                     +pGfrFhPtdeelv++yLk+k+++k+l++ e ik+vdiyk++PwdLp + + ++ekewyf+++rd+ky+++ r+nr+t++g+Wkatg+d++++s+
  Vang02g14650.1  14 MPGFRFHPTDEELVDFYLKRKIQQKSLPI-ELIKQVDIYKHDPWDLPkELAGTGEKEWYFYCPRDRKYRNSARPNRVTRAGFWKATGTDRPIYSS 107
                     79***************************.89***************445566899*************************************** PP

             NAM  96 kgelvglkktLvfykgrapkgektdWvmheyrl 128
                     +g+ +glkk+Lvfy+gra kg ktdW+mhe+rl
  Vang02g14650.1 108 EGKCIGLKKSLVFYRGRAAKGMKTDWMMHEFRL 140
                     *******************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019412.09E-5611171IPR003441NAC domain
PROSITE profilePS5100555.87613171IPR003441NAC domain
PfamPF023653.8E-2615140IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 372 aa     Download sequence    Send to blast
MEERNEMEKI DDVMPGFRFH PTDEELVDFY LKRKIQQKSL PIELIKQVDI YKHDPWDLPK  60
ELAGTGEKEW YFYCPRDRKY RNSARPNRVT RAGFWKATGT DRPIYSSEGK CIGLKKSLVF  120
YRGRAAKGMK TDWMMHEFRL PCISDSAPSK KLSDKTLPPS DSWAICRIFK KTNSLSMAQK  180
ALSHPWISQL SGSMVSDMFT QGAETNHHLG SPAIQFCYEK QELNQVSNSD INTNFTDSDI  240
ASYKPINSST VPKPSPQIPV SDDFIFYTEH TKCTLDASSM LSPNPDYITF EEPNQQQYSG  300
FSTNLPHFIQ QNMSTETVTK EQQDWETIGR ATGFPFTLLP PYDAWKSSVA WDSSSCPSDM  360
STTYSTSKCY T*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A3e-5311743171Stress-induced transcription factor NAC1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapVang02g14650.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150440.0AP015044.1 Vigna angularis var. angularis DNA, chromosome 11, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017439160.10.0PREDICTED: protein FEZ-like
SwissprotQ9FIW54e-93NAC94_ARATH; Putative NAC domain-containing protein 94
TrEMBLA0A0L9VNK10.0A0A0L9VNK1_PHAAN; Uncharacterized protein
STRINGXP_007151225.10.0(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF20133490
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G39820.12e-95NAC domain containing protein 94
Publications ? help Back to Top
  1. Yang K, et al.
    Genome sequencing of adzuki bean (Vigna angularis) provides insight into high starch and low fat accumulation and domestication.
    Proc. Natl. Acad. Sci. U.S.A., 2015. 112(43): p. 13213-8
    [PMID:26460024]