PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vang02g10450.1
Organism
Vigna angularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family bZIP
Protein Properties Length: 521aa    MW: 57775 Da    PI: 6.0362
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Vang02g10450.1genomeSNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_129.81.3e-09233275345
                     XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45 
                     + k  rr+++NReAAr+sR+RKka++++Le    +L++  ++L
  Vang02g10450.1 233 DQKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQEL 275
                     568899************************9777777666554 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.1E-7225278No hitNo description
PfamPF077167.8E-7231277IPR004827Basic-leucine zipper domain
SMARTSM003388.7E-8231294IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.415233277IPR004827Basic-leucine zipper domain
SuperFamilySSF579598.13E-7235278No hitNo description
CDDcd147086.33E-24235287No hitNo description
PROSITE patternPS000360238253IPR004827Basic-leucine zipper domain
PfamPF141443.5E-33317392IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009410Biological Processresponse to xenobiotic stimulus
GO:0009627Biological Processsystemic acquired resistance
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 521 aa     Download sequence    Send to blast
MGSRTTGGFG VEDDKGAERG MPSFNSELPI SNSRCEYLSV GACIESYLGL REIFVLCPLA  60
WLHNTLMLDT CVTMLRGLGL ILHIVFSYAE GSTIDSFRVS DFGAFDQPYR VEDAVGLSGN  120
PIYNSLKVSS QTIYPGSVPI HSLDQLPTSL DKSPLTNQTE LHRLRLQKVQ SSNPDTILIG  180
NTDNQEESAM ADASPRTDIS TDVDTDDKNQ PFDRNESLTI VSDSSDRSKD KSDQKTLRRL  240
AQNREAARKS RLRKKAYVQQ LESSRLKLTQ LEQELQRARQ QGIFISSSGD QAHTLSGNGA  300
MQFDAEYARW LEEQNRQINE LRAAVNSHAS DTELRMIVDG ILAHYDEIFR LKGVAAKADV  360
FHLLSGMWKT PAERCFLWLG GFRSSELLKL LANQLEPLTE QQLMGITNLQ QSSQQAEDAL  420
SQGMEALQQS LAETLSTGAP ASSGSSGNVA NYMGQMAMAM GKLGTLEGFI RQADNLRQQT  480
LQQMHRILTT RQSARALLAI HDYFSRLRAL SSLWLARPRD *
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional regulator involved in defense response. {ECO:0000250|UniProtKB:Q7X993}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00349DAPTransfer from AT3G12250Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapVang02g10450.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAF4026080.0AF402608.1 Phaseolus vulgaris TGA-type basic leucine zipper protein TGA2.1 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017433095.10.0PREDICTED: transcription factor TGA6
RefseqXP_017433096.10.0PREDICTED: transcription factor TGA6
RefseqXP_017433097.10.0PREDICTED: transcription factor TGA6
RefseqXP_017433099.10.0PREDICTED: transcription factor TGA6
SwissprotQ6IVC20.0TGAL1_ORYSJ; Transcription factor TGAL1
TrEMBLA0A0L9V3510.0A0A0L9V351_PHAAN; Uncharacterized protein
TrEMBLA0A0S3S8Y70.0A0A0S3S8Y7_PHAAN; Uncharacterized protein
STRINGXP_007133721.10.0(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF14703494
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G12250.21e-154TGACG motif-binding factor 6
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]
  2. Chern M, et al.
    Interaction specificity and coexpression of rice NPR1 homologs 1 and 3 (NH1 and NH3), TGA transcription factors and Negative Regulator of Resistance (NRR) proteins.
    BMC Genomics, 2014. 15: p. 461
    [PMID:24919709]