PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vang02g05950.1
Organism
Vigna angularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family bHLH
Protein Properties Length: 241aa    MW: 26423.2 Da    PI: 7.1254
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Vang02g05950.1genomeSNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH16.91.2e-05201225731
                     HHHHHHHHHHHHHHHHHHCTSCCC. CS
             HLH   7 erErrRRdriNsafeeLrellPkas 31 
                       Er+RR ++  +f  L++l+P++s
  Vang02g05950.1 201 TTERQRRVDLSRKFYALKQLIPNPS 225
                     57*********************84 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000833.49E-5189231No hitNo description
Gene3DG3DSA:4.10.280.107.5E-4191226IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474593.63E-5198230IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 241 aa     Download sequence    Send to blast
MVSKSEAVMS LTSMQPQNTL GMENLAYTSF SGEDASAVAM EIIAHPQQNS YNQVNNFNPQ  60
FVQVVNNHGS CEELYCFPTH SSALERGHHH HQFPYSTPTP DLLSLLHLPM XFENPSTNVP  120
KLSGPMGTTD SRNVSSVSYD PFLHLQAPPP ALGNDFAFGG RGVIQGSGIA NQDFGNGVVE  180
FTQDVGKKRG GKRTNHFTST TTERQRRVDL SRKFYALKQL IPNPSKDRDI SVHVGQAYLP  240
*
Cis-element ? help Back to Top
SourceLink
PlantRegMapVang02g05950.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150440.0AP015044.1 Vigna angularis var. angularis DNA, chromosome 11, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017438173.11e-167PREDICTED: transcription factor bHLH91-like
TrEMBLA0A0L9V9Y31e-137A0A0L9V9Y3_PHAAN; Uncharacterized protein
STRINGXP_007156379.11e-124(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF14498811
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G31210.18e-19bHLH family protein