PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Vang02g03600.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
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Family | bHLH | ||||||||
Protein Properties | Length: 211aa MW: 24291.9 Da PI: 9.1312 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 38 | 3e-12 | 8 | 57 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 +h+e Er+RR+++ + ++Lr+llP ++K s ++ + +A++YI++Lq Vang02g03600.2 8 MHKETERQRRQEMGKLCNNLRSLLPLeY---IKGKRSTSDHVHEAMNYINHLQ 57 7*************************77...*********************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00083 | 2.31E-9 | 2 | 61 | No hit | No description |
SuperFamily | SSF47459 | 4.32E-15 | 3 | 73 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
PROSITE profile | PS50888 | 13.452 | 4 | 56 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 6.8E-11 | 6 | 74 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 1.6E-9 | 8 | 57 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 3.3E-4 | 10 | 62 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 211 aa Download sequence Send to blast |
MDENKKWMHK ETERQRRQEM GKLCNNLRSL LPLEYIKGKR STSDHVHEAM NYINHLQDKV 60 KQLQEKRDAL LKVSNNLSSI ENESSSATHL PPLVLVHPFP GGLEIICSHS FRKSAFPMSR 120 LLDILHKEGL NVVNTTSIRR DGRFIHTIQS EDPNHSNMID TDYSELQIKI TEALSSSIIS 180 MVQPISPAGQ RQWLIKWNHD FKDVTKMLMI * |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Vang02g03600.2 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AP015044 | 0.0 | AP015044.1 Vigna angularis var. angularis DNA, chromosome 11, almost complete sequence, cultivar: Shumari. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_017439388.1 | 1e-156 | PREDICTED: transcription factor bHLH36-like isoform X1 | ||||
TrEMBL | A0A0L9VIM3 | 1e-128 | A0A0L9VIM3_PHAAN; Uncharacterized protein | ||||
STRING | XP_007152369.1 | 1e-107 | (Phaseolus vulgaris) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G51780.1 | 2e-28 | bHLH family protein |