PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vang02g03600.1
Organism
Vigna angularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family bHLH
Protein Properties Length: 307aa    MW: 35227 Da    PI: 9.7607
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Vang02g03600.1genomeSNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH37.15.7e-12857455
                    HHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  4 ahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55
                    +h+e Er+RR+++ +  ++Lr+llP       ++K s ++ + +A++YI++Lq
  Vang02g03600.1  8 MHKETERQRRQEMGKLCNNLRSLLPLeY---IKGKRSTSDHVHEAMNYINHLQ 57
                    7*************************77...*********************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000833.49E-9261No hitNo description
SuperFamilySSF474591.05E-14373IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088813.452456IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.4E-10674IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000103.0E-9857IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003533.3E-41062IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 307 aa     Download sequence    Send to blast
MDENKKWMHK ETERQRRQEM GKLCNNLRSL LPLEYIKGKR STSDHVHEAM NYINHLQDKV  60
KQLQEKRDAL LKVSNNLSSI ENESSSATHL PPLVLVHPFP GGLEIICSHS FRKSAFPMSR  120
LLDILHKEGL NVVNTTSIRR DGRFIHTIQS EDPNHSNMID TDYSELQIKI TEALSSSIWS  180
PSFNHLQVCK RLCLNLKIAN ILGKIKILFI RMFLIAYTLN LSDLYRSELV KSCTLSATIV  240
GAVRRPVIQH LLYDQLNHKY VGPSLSLYCT SLTVISMVQP ISPAGQRQWL IKWNHDFKDV  300
TKMLMI*
Cis-element ? help Back to Top
SourceLink
PlantRegMapVang02g03600.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150440.0AP015044.1 Vigna angularis var. angularis DNA, chromosome 11, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017439388.11e-127PREDICTED: transcription factor bHLH36-like isoform X1
TrEMBLA0A0L9VIM31e-126A0A0L9VIM3_PHAAN; Uncharacterized protein
STRINGXP_007152369.11e-106(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF79233125
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51780.18e-27bHLH family protein