PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vang01g18310.4
Common NameLR48_Vigan07g262500
Organism
Vigna angularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family bZIP
Protein Properties Length: 83aa    MW: 9854.37 Da    PI: 11.8645
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Vang01g18310.4genomeSNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_129.51.6e-091401049
                    HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1 10 kqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkel 49
                    +q+NR +ArrsR RKk  +e+L++ +  L  eN++Lk++l
  Vang01g18310.4  1 MQSNRDSARRSRWRKKRHLENLTNQANRLRMENRELKNRL 40
                    79***********************************876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.9E-7148No hitNo description
SuperFamilySSF579594.71E-9148No hitNo description
PfamPF001707.7E-7140IPR004827Basic-leucine zipper domain
PROSITE profilePS502178.714140IPR004827Basic-leucine zipper domain
CDDcd147022.04E-9146No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 83 aa     Download sequence    Send to blast
MQSNRDSARR SRWRKKRHLE NLTNQANRLR MENRELKNRL CLTMHQNLLL SLENERLRSE  60
SVTLMATLSN LYQILATMIS QQ*
Cis-element ? help Back to Top
SourceLink
PlantRegMapVang01g18310.4
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150361e-137AP015036.1 Vigna angularis var. angularis DNA, chromosome 3, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017429986.12e-50PREDICTED: bZIP transcription factor 2-like
TrEMBLA0A0L9V1T94e-49A0A0L9V1T9_PHAAN; Uncharacterized protein
TrEMBLA0A0S3RPV23e-49A0A0S3RPV2_PHAAN; Uncharacterized protein
STRINGXP_007160935.18e-41(Phaseolus vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22850.21e-13basic leucine-zipper 6
Publications ? help Back to Top
  1. Yang K, et al.
    Genome sequencing of adzuki bean (Vigna angularis) provides insight into high starch and low fat accumulation and domestication.
    Proc. Natl. Acad. Sci. U.S.A., 2015. 112(43): p. 13213-8
    [PMID:26460024]