PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vang01g18310.1
Common NameLR48_Vigan07g262500
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family bZIP
Protein Properties Length: 137aa    MW: 16221.6 Da    PI: 10.432
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Vang01g18310.1genomeSNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_131.63.5e-105094549
                    CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1  5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkel 49
                    ++ rr+q+NR +ArrsR RKk  +e+L++ +  L  eN++Lk++l
  Vang01g18310.1 50 RKLRRMQSNRDSARRSRWRKKRHLENLTNQANRLRMENRELKNRL 94
                    5789**************************************876 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.3E-846110IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.0944894IPR004827Basic-leucine zipper domain
SuperFamilySSF579596.35E-1050102No hitNo description
Gene3DG3DSA:1.20.5.1703.0E-850102No hitNo description
PfamPF001709.4E-85094IPR004827Basic-leucine zipper domain
CDDcd147022.64E-1351100No hitNo description
PROSITE patternPS0003605368IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 137 aa     Download sequence    Send to blast
MFFHEEAQPV LEIMFTPTEI EELFSLVNEP LSPESGSQEL NRVVRSTHER KLRRMQSNRD  60
SARRSRWRKK RHLENLTNQA NRLRMENREL KNRLCLTMHQ NLLLSLENER LRSESVTLMA  120
TLSNLYQILA TMISQQ*
Cis-element ? help Back to Top
SourceLink
PlantRegMapVang01g18310.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150360.0AP015036.1 Vigna angularis var. angularis DNA, chromosome 3, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017429986.17e-93PREDICTED: bZIP transcription factor 2-like
TrEMBLA0A0L9V1T92e-91A0A0L9V1T9_PHAAN; Uncharacterized protein
TrEMBLA0A0S3RPV22e-91A0A0S3RPV2_PHAAN; Uncharacterized protein
STRINGXP_007160935.18e-72(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF59963052
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22850.22e-16basic leucine-zipper 6
Publications ? help Back to Top
  1. Yang K, et al.
    Genome sequencing of adzuki bean (Vigna angularis) provides insight into high starch and low fat accumulation and domestication.
    Proc. Natl. Acad. Sci. U.S.A., 2015. 112(43): p. 13213-8
    [PMID:26460024]