PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vang01g16570.1
Common NameLR48_Vigan07g280000
Organism
Vigna angularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family bZIP
Protein Properties Length: 149aa    MW: 17331.6 Da    PI: 10.0729
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Vang01g16570.1genomeSNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_143.66.2e-142281362
                    XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1  3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62
                    el+r +rkq+NR +ArrsR RK++  + L+e  ++L++eN+   ++l+  ++++ kl + 
  Vang01g16570.1 22 ELRRKKRKQSNRDSARRSRMRKQKHFDDLTEQLQSLQKENDLILNQLNLTTQHYLKLHAL 81
                    799*************************************99999999999999998766 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.2E-152084IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.4E-102280No hitNo description
PROSITE profilePS5021710.5422285IPR004827Basic-leucine zipper domain
PfamPF001709.2E-112279IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.0E-112379No hitNo description
CDDcd147024.26E-192575No hitNo description
PROSITE patternPS0003602742IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 149 aa     Download sequence    Send to blast
MASSTGTSST SPSQDDLHLL MELRRKKRKQ SNRDSARRSR MRKQKHFDDL TEQLQSLQKE  60
NDLILNQLNL TTQHYLKLHA LNSILVAQKT ELAQTLHSFN HIIKLINDTN HYYHHHNDNK  120
TNNNFIIPMH TPFLNHPIVA TADNMCLW*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12344RRKKRKQSNRDSARRSRMRKQK
23643RRSRMRKQ
Cis-element ? help Back to Top
SourceLink
PlantRegMapVang01g16570.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150360.0AP015036.1 Vigna angularis var. angularis DNA, chromosome 3, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017429721.11e-105PREDICTED: bZIP transcription factor 44-like
TrEMBLA0A0L9V2C61e-104A0A0L9V2C6_PHAAN; Uncharacterized protein
STRINGXP_007160724.15e-55(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF61334147
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75390.18e-30basic leucine-zipper 44
Publications ? help Back to Top
  1. Yang K, et al.
    Genome sequencing of adzuki bean (Vigna angularis) provides insight into high starch and low fat accumulation and domestication.
    Proc. Natl. Acad. Sci. U.S.A., 2015. 112(43): p. 13213-8
    [PMID:26460024]