PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Vang01g16360.1

Common Name

LR48_Vigan07g283100

Organism

Vigna angularis

Taxonomic ID

3914

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna

Family

bZIP

Protein Properties

Length: 573aa MW: 62551 Da PI: 6.8078

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Vang01g16360.1	genome	SNU	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	35.2	2.7e-11	416	474	5	63
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 kr++r NR++A rs +RK +i eLe kv++L++e ++L + +l+ ++lkse+ Vang01g16360.1 416 KRAKRILANRLSAARSKERKMRYISELELKVQTLQTETTTLSTQFTKLQMDNSELKSEN 474 9********************************************************98 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	8.7E-14	412	476	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	10.955	414	477	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	1.7E-10	416	474	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	9.7E-11	416	472	No hit	No description
SuperFamily	SSF57959	4.57E-10	416	471	No hit	No description
CDD	cd14703	3.84E-14	417	489	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0005634	Cellular Component	nucleus
GO:0005829	Cellular Component	cytosol
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 573 aa Download sequence Send to blast
LVSIVESCDF LVEGLAVVES MEGVDQSNLK RNGSGFGSSS GANLRPPNRL NTAVPVSQLG 60 VAENQKPYGI PPSHPNTNIS PSSAYPQFFG SQSHSNSVSQ RLGSPNLSSV SSHSRSLSQP 120 SFFSLDSLPP LSPSPYREPS VSDPISLDLS AEESLVNPHA PLPNRGPALQ LGHSLPPRKG 180 HRRSSSDSPL GISDFIQSAP QSVPSRTWSD RDVSRGGNLG YEKPIQLVLK EPIKSMDRVD 240 GFGGEPVVGR KEDDSLDDLF SAYMNLDNID TLNFSGMEDK DLDSRTSGSK TVESSDNEVE 300 SHANGKTTGA RGASSSCSED RREGVKRSSN GDIAPGSRHR RSYSLDSSIG NFHIGDESPK 360 LPPLQNRGGQ HSPSNSLEGK TSETSIEFGN GEFSSEELKK IKENDKLAEI AMADPKRAKR 420 ILANRLSAAR SKERKMRYIS ELELKVQTLQ TETTTLSTQF TKLQMDNSEL KSENNEYKLR 480 IQALEQQSQL KDALNETLDA EVRRLRRTVA DLGGESLLSS RMAQQLAISQ QMFPLQHQQH 540 PNQLRHGQLH NSHSQEQTQT QSQRQNGKAT AY*

Sequence ? help Back to Top

Protein Sequence Length: 573 aa Download sequence Send to blast

LVSIVESCDF LVEGLAVVES MEGVDQSNLK RNGSGFGSSS GANLRPPNRL NTAVPVSQLG  60
VAENQKPYGI PPSHPNTNIS PSSAYPQFFG SQSHSNSVSQ RLGSPNLSSV SSHSRSLSQP  120
SFFSLDSLPP LSPSPYREPS VSDPISLDLS AEESLVNPHA PLPNRGPALQ LGHSLPPRKG  180
HRRSSSDSPL GISDFIQSAP QSVPSRTWSD RDVSRGGNLG YEKPIQLVLK EPIKSMDRVD  240
GFGGEPVVGR KEDDSLDDLF SAYMNLDNID TLNFSGMEDK DLDSRTSGSK TVESSDNEVE  300
SHANGKTTGA RGASSSCSED RREGVKRSSN GDIAPGSRHR RSYSLDSSIG NFHIGDESPK  360
LPPLQNRGGQ HSPSNSLEGK TSETSIEFGN GEFSSEELKK IKENDKLAEI AMADPKRAKR  420
ILANRLSAAR SKERKMRYIS ELELKVQTLQ TETTTLSTQF TKLQMDNSEL KSENNEYKLR  480
IQALEQQSQL KDALNETLDA EVRRLRRTVA DLGGESLLSS RMAQQLAISQ QMFPLQHQQH  540
PNQLRHGQLH NSHSQEQTQT QSQRQNGKAT AY*

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Vang01g16360.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	AP015036	0.0	AP015036.1 Vigna angularis var. angularis DNA, chromosome 3, almost complete sequence, cultivar: Shumari.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_017430867.1	0.0	PREDICTED: transcription factor RF2a-like
TrEMBL	A0A0L9V2M8	0.0	A0A0L9V2M8_PHAAN; Uncharacterized protein
TrEMBL	A0A0S3RQB1	0.0	A0A0S3RQB1_PHAAN; Uncharacterized protein
STRING	XP_007160692.1	0.0	(Phaseolus vulgaris)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF2272	34	84

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G21230.1	2e-69	bZIP family protein

Publications ? help Back to Top
Yang K, et al. Genome sequencing of adzuki bean (Vigna angularis) provides insight into high starch and low fat accumulation and domestication. Proc. Natl. Acad. Sci. U.S.A., 2015. 112(43): p. 13213-8 [PMID:26460024]