PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Vang01g14980.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
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Family | ERF | ||||||||
Protein Properties | Length: 138aa MW: 15708.7 Da PI: 6.6822 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 22.7 | 2.4e-07 | 7 | 26 | 2 | 22 |
AP2 2 gykGVrwdkkrgrWvAeIrdp 22 +y+GVr+++ +g+Wv+eIr+p Vang01g14980.1 7 RYRGVRQRH-WGSWVSEIRHP 26 69******9.*********96 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00380 | 0.0062 | 7 | 59 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 5.5E-10 | 7 | 27 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 9.427 | 7 | 47 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 138 aa Download sequence Send to blast |
MARPQQRYRG VRQRHWGSWV SEIRHPILCY MASLQMTRQA LASSGSERKP SVPNATPASQ 60 PKSLTVKSEQ THQVLPHKRE EEDQDSEANR DVKMARNVES LPLQFKPLEE DHIEQMIEEL 120 LDYGSVELSS VFSPQAL* |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Vang01g14980.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AP015036 | 0.0 | AP015036.1 Vigna angularis var. angularis DNA, chromosome 3, almost complete sequence, cultivar: Shumari. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_017429773.1 | 1e-72 | PREDICTED: protein PPLZ02-like | ||||
Swissprot | Q94AW5 | 3e-27 | ERF03_ARATH; Ethylene-responsive transcription factor ERF003 | ||||
TrEMBL | A0A0L9V1V3 | 3e-71 | A0A0L9V1V3_PHAAN; Uncharacterized protein | ||||
TrEMBL | A0A0S3RP70 | 3e-71 | A0A0S3RP70_PHAAN; Uncharacterized protein | ||||
STRING | XP_007161152.1 | 1e-52 | (Phaseolus vulgaris) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G25190.1 | 1e-29 | ERF family protein |
Publications ? help Back to Top | |||
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