PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vang0191s00050.1
Organism
Vigna angularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family bZIP
Protein Properties Length: 307aa    MW: 33946.4 Da    PI: 7.3844
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Vang0191s00050.1genomeSNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_123.11.6e-071662131156
                       HHHHHHHHHHHHHHHHHHHHHHHH..HHHHHHHHHHHHHHHHHHHHHH CS
            bZIP_1  11 qkNReAArrsRqRKkaeieeLeek..vkeLeaeNkaLkkeleelkkev 56 
                         NR +A rs +RK  +i eLe k  ++ L+++N++Lk +l+ +++++
  Vang0191s00050.1 166 LANRQSAARSKERKMRYISELEHKrdSAGLTNQNSELKFRLQCMEQQA 213
                       67********************9933556*********9999888776 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003380.0092156221IPR004827Basic-leucine zipper domain
SuperFamilySSF579596.19E-7163212No hitNo description
Gene3DG3DSA:1.20.5.1704.4E-8164214No hitNo description
CDDcd147035.42E-16164212No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 307 aa     Download sequence    Send to blast
MEQLSIPQYN PSQMRAKHQH QFDDSFDALN SSSTDDKNGT ENRDDLDSRA SGTKTNGGDS  60
SDNEAESSVN ESEDGAARHG GSEKREGMKR SAGGEIAPTT RHYRSVSMDS FISKLNFGDE  120
SPKLPPSPGP KTGLISLAGG VDGNSSAFSL EFGNGEFSFG VIFRILANRQ SAARSKERKM  180
RYISELEHKR DSAGLTNQNS ELKFRLQCME QQAKLRDGIS ALSFIIFHLN VHGEYFLRKS  240
ARVGVKEFCR WLPSSTNFFE NSNKRAGIPP SHPHQILPIS PYSQIPVTRQ QQMGSHNGCF  300
KNEEEH*
Cis-element ? help Back to Top
SourceLink
PlantRegMapVang0191s00050.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150420.0AP015042.1 Vigna angularis var. angularis DNA, chromosome 9, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_014524330.11e-112probable transcription factor PosF21
TrEMBLA0A1S3W1451e-111A0A1S3W145_VIGRR; probable transcription factor PosF21
STRINGXP_007131742.11e-111(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF22723484
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38900.13e-66bZIP family protein