PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vang0190s00010.1
Organism
Vigna angularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family NAC
Protein Properties Length: 402aa    MW: 45555 Da    PI: 5.0887
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Vang0190s00010.1genomeSNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM83.93.3e-26662072128
               NAM   2 ppGfrFhPtdeelvveyLkkkvegkk......leleevikevd....iykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra....... 77 
                       p G++F+P+d el+ e+L+ k+   +      +  +e+i++++    i++++P++Lp  +k++ +  + F+k+ ++yat++rk+r+       
  Vang0190s00010.1  66 PLGVKFDPSDVELL-EHLAGKCGVGNtqpdmfI--KEFISTLEgdqgICYTHPENLP-GAKKDGSYFHIFHKTINAYATSQRKRRKihhpqgl 154
                       89************.999999877664555332..333443323344**********.55566778899****************85665555 PP

               NAM  78 .tksgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128
                         ++  W++tg++k++++ +g  +g kk++v++  +++ +k+ k++Wvmh+y+l
  Vang0190s00010.1 155 sEEHWHWHKTGRTKAIMQ-NGMCKGFKKIMVLHvrSKSGSKPFKSNWVMHQYHL 207
                       444667************.999***********6544556666*********98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019416.28E-3150226IPR003441NAC domain
PROSITE profilePS5100526.31265226IPR003441NAC domain
PfamPF023654.3E-1166207IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 402 aa     Download sequence    Send to blast
LDVVFFFFDT MARSWLIDFG GFAKKVKNTT LSSADQIKDC GAYRECPNCH YRIDNSDVSS  60
EWPGFPLGVK FDPSDVELLE HLAGKCGVGN TQPDMFIKEF ISTLEGDQGI CYTHPENLPG  120
AKKDGSYFHI FHKTINAYAT SQRKRRKIHH PQGLSEEHWH WHKTGRTKAI MQNGMCKGFK  180
KIMVLHVRSK SGSKPFKSNW VMHQYHLGTE KNEKEGEYVV SKFFYQQQKQ TEKNEDNPMV  240
EDLDNIVSRT SPRTPKPNPP HPPRAGNSVD CDDCIDETVP LPFVQTILGE SHAPISDVQD  300
LDNSACLPGE LQAEKHTEYD GLDDILLCKE ILDSSDLLND YGLDSSNLCD LEFYDNQIAR  360
NDNESCGISV LDTLELDTPD FDHSNLNFCS QYSILEWMGR L*
Cis-element ? help Back to Top
SourceLink
PlantRegMapVang0190s00010.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150370.0AP015037.1 Vigna angularis var. angularis DNA, chromosome 4, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017417583.10.0PREDICTED: NAC domain-containing protein 8-like isoform X1
TrEMBLA0A0S3RW400.0A0A0S3RW40_PHAAN; Uncharacterized protein
STRINGXP_007141004.10.0(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF75723047
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G01600.15e-90NAC domain containing protein 44