PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vang0184s00230.1
Organism
Vigna angularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family bZIP
Protein Properties Length: 323aa    MW: 36784.9 Da    PI: 6.5188
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Vang0184s00230.1genomeSNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_131.34.3e-10196239548
                       CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
            bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke 48 
                       kr +r   NR +A+rsR RK+++i eLe+ + +L+ae + L  +
  Vang0184s00230.1 196 KRVKRILANRQSAQRSRVRKLQYISELERSATSLQAEVSVLSPR 239
                       899*********************************98777655 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003383.4E-13192256IPR004827Basic-leucine zipper domain
PfamPF077164.5E-9193241IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.393194246IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.41E-10196250No hitNo description
Gene3DG3DSA:1.20.5.1701.6E-12196247No hitNo description
CDDcd147034.30E-20197247No hitNo description
PROSITE patternPS000360199214IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 323 aa     Download sequence    Send to blast
MAQLPPKIPN LSPGWPDFSS QHQKMPLPPL INDTTTTTHQ NQNPSWVDEF LDFSSARRGA  60
HRRSVSDSIT YLDAPMRCGE NNNHNNSNGN GNEFDRFDDE QFMSMFTDEV VLSGVPLPPP  120
TTLSSSNPSS PSDQNFFHDE KESSRKERKL QKEEEEHHHQ LKNEAAEVES QCMQEIAQPP  180
NDTNTSSSNE RISDPKRVKR ILANRQSAQR SRVRKLQYIS ELERSATSLQ AEVSVLSPRV  240
AFLDHQRLLL NVDNSALKQR IAALAQDKIF KDAHQEALKR EIERLRQVYQ QQRLKKMENA  300
AESGPLPLCD VQREKEVQLL NV*
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator. {ECO:0000269|PubMed:17719007}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapVang0184s00230.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150400.0AP015040.1 Vigna angularis var. angularis DNA, chromosome 7, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017424409.10.0PREDICTED: basic leucine zipper 34-like
SwissprotQ9M2K41e-111BZP61_ARATH; Basic leucine zipper 61
TrEMBLA0A0S3SHR10.0A0A0S3SHR1_PHAAN; Uncharacterized protein
STRINGXP_007149772.10.0(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF20113488
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42380.21e-105bZIP family protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  2. Gibalová A, et al.
    Characterization of pollen-expressed bZIP protein interactions and the role of ATbZIP18 in the male gametophyte.
    Plant Reprod, 2017. 30(1): p. 1-17
    [PMID:27896439]
  3. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]