PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Vang0172s00690.1

Common Name

LR48_Vigan03g240700

Organism

Vigna angularis

Taxonomic ID

3914

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna

Family

bZIP

Protein Properties

Length: 540aa MW: 60290 Da PI: 6.7473

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Vang0172s00690.1	genome	SNU	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	31.6	3.6e-10	186	247	1	62
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 eke +r rr NRe+Ar +R++a +eeL++k+++L eN++Lkk + lk ++++ s+ Vang0172s00690.1 186 EKEARRMRRILANRESARQTIRRRQALCEELTKKAATLVVENESLKKWMFYLKIHISSTLSD 247 7999******************************************9888888777776665 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	1.7E-5	182	232	No hit	No description
Pfam	PF00170	3.7E-9	186	246	IPR004827	Basic-leucine zipper domain
SMART	SM00338	9.5E-8	186	250	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	1.07E-5	190	236	No hit	No description
CDD	cd14702	6.07E-12	191	232	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 540 aa Download sequence Send to blast
MDAESEKRAF TSTSVSRSSS CEGMDRLVDK EEMEAAETLA QLAMRDSHST DKWCTKLCAI 60 PEVHPSPTLH SDSSLGTADQ AIADQQQDEK VHTTASVEAE RTQQNNCSEP MEVQQDANLI 120 PNSSHTEVEQ DANLIHDSSH TEVEQEQDSN VSHKSKEQDS NVNVTHKSNN LLGRYNRSRK 180 NLTEEEKEAR RMRRILANRE SARQTIRRRQ ALCEELTKKA ATLVVENESL KKWMFYLKIH 240 ISSTLSDKKE KDLALKEYQS LETTNKYLKA QIAKSTNTEE EKTPVEPESS VAEVTPSSGS 300 GPWFLYNPFP VQHVFWPSPL QPTYPVHLPN ASFNPVIIPS IANVPCSSES ELYHKQNNLI 360 NDKQTPNPFY MFPCPWIFPC PQFGNGQSSP SCSLKDKQNN LSLGKPCSSS SSLNTLANVD 420 YRAWTEARLV NDPSRFSLDG GEKKTGCHII ENYHGPSLGC NGQACASEQE NELQLHSSPN 480 NKASSTAYIG ASSVEKKQKQ FICQGKSLAD AVAAAEARKR RKELTKQKSI HSRQSRMQC*

Sequence ? help Back to Top

Protein Sequence Length: 540 aa Download sequence Send to blast

MDAESEKRAF TSTSVSRSSS CEGMDRLVDK EEMEAAETLA QLAMRDSHST DKWCTKLCAI  60
PEVHPSPTLH SDSSLGTADQ AIADQQQDEK VHTTASVEAE RTQQNNCSEP MEVQQDANLI  120
PNSSHTEVEQ DANLIHDSSH TEVEQEQDSN VSHKSKEQDS NVNVTHKSNN LLGRYNRSRK  180
NLTEEEKEAR RMRRILANRE SARQTIRRRQ ALCEELTKKA ATLVVENESL KKWMFYLKIH  240
ISSTLSDKKE KDLALKEYQS LETTNKYLKA QIAKSTNTEE EKTPVEPESS VAEVTPSSGS  300
GPWFLYNPFP VQHVFWPSPL QPTYPVHLPN ASFNPVIIPS IANVPCSSES ELYHKQNNLI  360
NDKQTPNPFY MFPCPWIFPC PQFGNGQSSP SCSLKDKQNN LSLGKPCSSS SSLNTLANVD  420
YRAWTEARLV NDPSRFSLDG GEKKTGCHII ENYHGPSLGC NGQACASEQE NELQLHSSPN  480
NKASSTAYIG ASSVEKKQKQ FICQGKSLAD AVAAAEARKR RKELTKQKSI HSRQSRMQC*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	517	522	RKRRKE

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Vang0172s00690.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	AP015037	0.0	AP015037.1 Vigna angularis var. angularis DNA, chromosome 4, almost complete sequence, cultivar: Shumari.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_017419142.1	0.0	PREDICTED: uncharacterized protein LOC108329449
TrEMBL	A0A0L9U899	0.0	A0A0L9U899_PHAAN; Uncharacterized protein
TrEMBL	A0A0S3RZ26	0.0	A0A0S3RZ26_PHAAN; Uncharacterized protein
STRING	XP_007162879.1	0.0	(Phaseolus vulgaris)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF6400	28	34

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G19490.1	1e-35	bZIP family protein

Publications ? help Back to Top
Yang K, et al. Genome sequencing of adzuki bean (Vigna angularis) provides insight into high starch and low fat accumulation and domestication. Proc. Natl. Acad. Sci. U.S.A., 2015. 112(43): p. 13213-8 [PMID:26460024]