PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Vang0145s00790.4 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
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Family | bZIP | ||||||||
Protein Properties | Length: 302aa MW: 33518 Da PI: 9.81 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 35 | 3e-11 | 203 | 261 | 5 | 63 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 kr++r NR +A rs +RK +i eLe kv++L++e ++L +l l+ +a l++++ Vang0145s00790.4 203 KRAKRILANRQSAARSKERKMRYISELEHKVQTLQTEATTLSAQLTLLQRDSAGLTNQN 261 9*************************************************999999887 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 2.1E-18 | 199 | 263 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.909 | 201 | 264 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 2.1E-10 | 203 | 260 | No hit | No description |
Pfam | PF00170 | 8.3E-10 | 203 | 261 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 1.41E-11 | 203 | 254 | No hit | No description |
CDD | cd14703 | 2.97E-25 | 204 | 255 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 302 aa Download sequence Send to blast |
MGENEEATND MMQRLHCSSF LKQPLNMEQL SIPQFNPSQM RARHQHQFDG GNSNKRAGIP 60 PSHPHQIPPI SPYSQIPVTR QQQMGRSNSD IPFGFSTVLQ SSPPLIPLRG RENPVLAKPA 120 QLVKRETPWD RGVDHSNLNF GDESPKLPPS PGPKTGLISP GGGVDGNSSA FSLEFGNGEF 180 SGPELKKIMA NEKLAEIALT DPKRAKRILA NRQSAARSKE RKMRYISELE HKVQTLQTEA 240 TTLSAQLTLL QRDSAGLTNQ NSELKFRLQS MEQQAKLRDG ISALSFVFFH FFSPFCFIDL 300 C* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Vang0145s00790.4 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AP015039 | 1e-140 | AP015039.1 Vigna angularis var. angularis DNA, chromosome 6, almost complete sequence, cultivar: Shumari. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_017433479.1 | 1e-90 | PREDICTED: probable transcription factor PosF21 isoform X1 | ||||
Refseq | XP_017433480.1 | 7e-91 | PREDICTED: probable transcription factor PosF21 isoform X2 | ||||
TrEMBL | A0A0L9V7C7 | 3e-89 | A0A0L9V7C7_PHAAN; Uncharacterized protein | ||||
TrEMBL | A0A0S3SDU0 | 3e-89 | A0A0S3SDU0_PHAAN; Uncharacterized protein | ||||
STRING | XP_007131742.1 | 8e-89 | (Phaseolus vulgaris) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38900.3 | 4e-55 | bZIP family protein |