PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vang0145s00790.2
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family bZIP
Protein Properties Length: 341aa    MW: 37552.1 Da    PI: 10.3399
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Vang0145s00790.2genomeSNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_135.12.8e-11185243563
                       CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
            bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                       kr++r   NR +A rs +RK  +i eLe kv++L++e ++L  +l  l+  +a l++++
  Vang0145s00790.2 185 KRAKRILANRQSAARSKERKMRYISELEHKVQTLQTEATTLSAQLTLLQRDSAGLTNQN 243
                       9*************************************************999999887 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.1E-18181245IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.909183246IPR004827Basic-leucine zipper domain
PfamPF001708.4E-10185243IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.69E-11185236No hitNo description
Gene3DG3DSA:1.20.5.1708.7E-12185242No hitNo description
CDDcd147035.99E-25186237No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 341 aa     Download sequence    Send to blast
MNTAKPLNME QLSIPQFNPS QMRARHQHQF DGGNSNKRAG IPPSHPHQIP PISPYSQIPV  60
TRQQQMGRSN SDIPFGFSTV LQSSPPLIPL RGRENPVLAK PAQLVKRETP WDRGVDHSNL  120
NFGDESPKLP PSPGPKTGLI SPGGGVDGNS SAFSLEFGNG EFSGPELKKI MANEKLAEIA  180
LTDPKRAKRI LANRQSAARS KERKMRYISE LEHKVQTLQT EATTLSAQLT LLQRDSAGLT  240
NQNSELKFRL QSMEQQAKLR DALNEALTAE VQRLKLATAE LSGDSHGSSC LIPQHSVNPL  300
MFQQQQPPTA SQQNIHLQHQ QQQQQHHQNG NGNSNSDIKQ *
Cis-element ? help Back to Top
SourceLink
PlantRegMapVang0145s00790.2
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT1345161e-160BT134516.1 Lotus japonicus clone JCVI-FLLj-16M11 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_027910179.11e-132probable transcription factor PosF21
TrEMBLA0A4D6LJE21e-131A0A4D6LJE2_VIGUN; Uncharacterized protein
STRINGXP_007131742.11e-127(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF22723484
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38900.34e-65bZIP family protein