PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vang0087s00370.1
Organism
Vigna angularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family NAC
Protein Properties Length: 527aa    MW: 57915.4 Da    PI: 4.6903
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Vang0087s00370.1genomeSNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM151.92.9e-47912172128
               NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 
                       +pGfrF+Ptd el+ ++Lk+kv+gkk++   vi+e+d+yk+ PwdLp k  +++++ ewyfF+++ kky +g r nr+t++gyWk+tgkd++v
  Vang0087s00370.1  91 TPGFRFRPTDVELIEFFLKRKVRGKKIPS-GVIAELDLYKYAPWDLPdKsVLQSGDLEWYFFCPQGKKYLSGGRLNRSTEAGYWKTTGKDRAV 182
                       69**************************9.99**************96446667788************************************ PP

               NAM  93 lskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                        + k+++vg+ ktLvf++g+apkg++tdWvmhe+rl
  Vang0087s00370.1 183 EH-KNRVVGMIKTLVFHTGKAPKGNRTDWVMHEFRL 217
                       *9.8999***************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019414.05E-5683240IPR003441NAC domain
PROSITE profilePS5100553.37390240IPR003441NAC domain
PfamPF023651.5E-2492217IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 527 aa     Download sequence    Send to blast
MRTKIELCAL TSSTFPGVHC ADEASSDCKG IVIHFTLFSF FLSNSSFSSL PIDLFLFLPL  60
LWVASQTAYY FAFSFSFLII FFLWMARRNS TPGFRFRPTD VELIEFFLKR KVRGKKIPSG  120
VIAELDLYKY APWDLPDKSV LQSGDLEWYF FCPQGKKYLS GGRLNRSTEA GYWKTTGKDR  180
AVEHKNRVVG MIKTLVFHTG KAPKGNRTDW VMHEFRLQDK EMVDEGISQD SYVICRIFQK  240
EGPGPRNGAQ YGKPYDEKDW DTDEEIDSVQ SDRVASVSTP LPIQPSGRHI SIAKDIHPST  300
SGCAGLTSEL CVSKLMPSCS AHHAIPTNQA ISVSCVSELM PSCSALSSPN CALGSVSHLS  360
AVPFAPNYDV DSVSCVSKLM SSCLPLASAP NNLVDASSSV PELMPSCTAR PSPSSPNHQD  420
DDNILSLLDY LKEDDDTMAV NENNGIEEVD PDRANNAECA PCSDQNVIFE NLGDLDSLVG  480
LGEGSLSSGQ KIGLSTSDMF YIGGDDMFRS WESQDFLELM DLAGPQ*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A1e-488624111169Stress-induced transcription factor NAC1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00583DAPTransfer from AT5G64060Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapVang0087s00370.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150350.0AP015035.1 Vigna angularis var. angularis DNA, chromosome 2, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017422801.10.0PREDICTED: NAC domain-containing protein 82-like
TrEMBLA0A0L9UF720.0A0A0L9UF72_PHAAN; Uncharacterized protein
TrEMBLA0A0S3REW80.0A0A0S3REW8_PHAAN; Uncharacterized protein
STRINGXP_007137718.10.0(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF33023465
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G64060.11e-83NAC domain containing protein 103