PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Vang0076s00540.1

Common Name

LR48_Vigan08g091400

Organism

Vigna angularis

Taxonomic ID

3914

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna

Family

VOZ

Protein Properties

Length: 493aa MW: 55166.2 Da PI: 5.4707

Description

VOZ family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Vang0076s00540.1	genome	SNU	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	VOZ	413.4	4e-127	239	465	1	217
VOZ 1 pppsaflgpkcalwdctrpaqgsewlqdycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaatakspwnaa 93 pppsafl+pkcalwdc+rpaqg+ew+++ycss+h+ la neglpg+tp+lrp+gi++kdg+lfaa+ ak+qgkevgip+cegaa++kspwna+ Vang0076s00540.1 239 PPPSAFLAPKCALWDCFRPAQGVEWCRNYCSSCHELLANNEGLPGMTPILRPGGIGVKDGPLFAAVLAKTQGKEVGIPSCEGAASTKSPWNAP 331 89***************************************************************************************96 PP VOZ 94 ..........elfdlsllegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlyeyeine 176 e+fdls+lege+irewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmke+gg+krsyymdpqp+s++ewhlyeyein+ Vang0076s00540.1 332 glkcylfsgaEFFDLSFLEGEAIREWLFFDKPRRAFESGNRKQRSLPDYSGRGWHESRKQVMKEHGGQKRSYYMDPQPLSYLEWHLYEYEINN 424 555555555589***************************************************************************** PP VOZ 177 ldalalyrlelklvdekksakgkvskdsladlqkklgrlta 217 d +alyrlelklv++kks+kgkv+k+sl+dlq+k+g+lta Vang0076s00540.1 425 HDGCALYRLELKLVEKKKSPKGKVTKESLNDLQNKMGQLTA 465 *************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 493 aa Download sequence Send to blast
MMRESSKGKF GSSSIQSMKE KEKHLVDKIQ GIFSNLQCAR KEGRGSDIVI FEEQMHQLLR 60 EWKAELESPA TSLADGSFDS FTSELAQLLQ VIEEKDDATS PLTKPGPLKT ELQTSNINDN 120 NFQFFQEKHF DDNQPLGHNF EGSASTLYNN AFNNSDMEQL DFHPFSLNQD MNHNQVGHNS 180 DLIGXVDLYQ DLGHNTEIKH SESNQFSIEG FDCSQFFGAE DTVHHGXNII PNILPNICPP 240 PSAFLAPKCA LWDCFRPAQG VEWCRNYCSS CHELLANNEG LPGMTPILRP GGIGVKDGPL 300 FAAVLAKTQG KEVGIPSCEG AASTKSPWNA PGLKCYLFSG AEFFDLSFLE GEAIREWLFF 360 DKPRRAFESG NRKQRSLPDY SGRGWHESRK QVMKEHGGQK RSYYMDPQPL SYLEWHLYEY 420 EINNHDGCAL YRLELKLVEK KKSPKGKVTK ESLNDLQNKM GQLTAAVLSS DDGIPIKGKT 480 NAKSENDGSP EN*

Sequence ? help Back to Top

Protein Sequence Length: 493 aa Download sequence Send to blast

MMRESSKGKF GSSSIQSMKE KEKHLVDKIQ GIFSNLQCAR KEGRGSDIVI FEEQMHQLLR  60
EWKAELESPA TSLADGSFDS FTSELAQLLQ VIEEKDDATS PLTKPGPLKT ELQTSNINDN  120
NFQFFQEKHF DDNQPLGHNF EGSASTLYNN AFNNSDMEQL DFHPFSLNQD MNHNQVGHNS  180
DLIGXVDLYQ DLGHNTEIKH SESNQFSIEG FDCSQFFGAE DTVHHGXNII PNILPNICPP  240
PSAFLAPKCA LWDCFRPAQG VEWCRNYCSS CHELLANNEG LPGMTPILRP GGIGVKDGPL  300
FAAVLAKTQG KEVGIPSCEG AASTKSPWNA PGLKCYLFSG AEFFDLSFLE GEAIREWLFF  360
DKPRRAFESG NRKQRSLPDY SGRGWHESRK QVMKEHGGQK RSYYMDPQPL SYLEWHLYEY  420
EINNHDGCAL YRLELKLVEK KKSPKGKVTK ESLNDLQNKM GQLTAAVLSS DDGIPIKGKT  480
NAKSENDGSP EN*

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator acting positively in the phytochrome B signaling pathway. Functions redundantly with VOZ2 to promote flowering downstream of phytochrome B (phyB). Down-regulates 'FLOWERING LOCUS C' (FLC) and up-regulates 'FLOWERING LOCUS T' (FT). Binds to the 38-bp cis-acting region of the AVP1 gene. Interacts with phyB in the cytoplasm and is translocated to the nucleus at signal transmission, where it is subjected to degradation in a phytochrome-dependent manner. {ECO:0000269\|PubMed:15295067, ECO:0000269\|PubMed:22904146}.

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Vang0076s00540.1

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: By far-red light. {ECO:0000269\|PubMed:22904146}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	AP015039	0.0	AP015039.1 Vigna angularis var. angularis DNA, chromosome 6, almost complete sequence, cultivar: Shumari.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_017431387.1	0.0	PREDICTED: transcription factor VOZ1
Refseq	XP_017431388.1	0.0	PREDICTED: transcription factor VOZ1
Swissprot	Q9SGQ0	1e-151	VOZ1_ARATH; Transcription factor VOZ1
TrEMBL	A0A0L9V569	0.0	A0A0L9V569_PHAAN; Uncharacterized protein
TrEMBL	A0A0S3SAZ7	0.0	A0A0S3SAZ7_PHAAN; Uncharacterized protein
STRING	GLYMA06G43890.3	0.0	(Glycine max)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF1498	34	94

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28520.2	1e-143	vascular plant one zinc finger protein

Publications ? help Back to Top
Ding Y, et al. Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] Yasui Y,Kohchi T VASCULAR PLANT ONE-ZINC FINGER1 and VOZ2 repress the FLOWERING LOCUS C clade members to control flowering time in Arabidopsis. Biosci. Biotechnol. Biochem., 2014. 78(11): p. 1850-5 [PMID:25351333] Yang K, et al. Genome sequencing of adzuki bean (Vigna angularis) provides insight into high starch and low fat accumulation and domestication. Proc. Natl. Acad. Sci. U.S.A., 2015. 112(43): p. 13213-8 [PMID:26460024] Kumar S,Choudhary P,Gupta M,Nath U VASCULAR PLANT ONE-ZINC FINGER1 (VOZ1) and VOZ2 Interact with CONSTANS and Promote Photoperiodic Flowering Transition. Plant Physiol., 2018. 176(4): p. 2917-2930 [PMID:29507119] Song C,Lee J,Kim T,Hong JC,Lim CO VOZ1, a transcriptional repressor of DREB2C, mediates heat stress responses in Arabidopsis. Planta, 2018. 247(6): p. 1439-1448 [PMID:29536220]