PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Vang0070s00070.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
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Family | ERF | ||||||||
Protein Properties | Length: 413aa MW: 45365.6 Da PI: 4.4976 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 27.5 | 8.1e-09 | 108 | 129 | 2 | 23 |
AP2 2 gykGVrwdkkrgrWvAeIrd.ps 23 +ykGVr +k +g+W+AeIrd ++ Vang0070s00070.1 108 KYKGVRMRK-WGKWAAEIRDpFK 129 8******99.**********554 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51032 | 10.889 | 108 | 218 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 2.1E-8 | 108 | 129 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 0.0089 | 108 | 166 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 3.2E-5 | 108 | 129 | IPR016177 | DNA-binding domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 413 aa Download sequence Send to blast |
MLEALNQSAK MMKKLKQKRN PFHDSKMTRK LRIICDDPDA TDSSSDEEEH FGNGRKVKRT 60 MVEIALPPVP VNSLVAAETS TESSNNEELN KKRVLAKNPS VKRQTCGKYK GVRMRKWGKW 120 AAEIRDPFKE SATDSKSATI DYSESSILSH TSPYSVLELD TSASNLTVSG KVSGNEVVET 180 KGLETEVAEI ETEGLKAESF EAEFAELDIP DLSMLSVPHP SAVASNAANV GAPSQFEFDW 240 FALDSLEHGF DEELGFDDDL AALEDIQIYG FDDGQPSELP DYDFDDIGAD EFADDVTRGE 300 VVVEIGEGDV GLSLRILLSK GMSEVVTTTG KLFQTSGDDE EQSKPRRPEV EPAIVVGHLD 360 MGTETTGAVV QWRGGEAKSS GERRGREVLR RDLGRRTVKV NKVLIFNPRT QL* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Vang0070s00070.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AP015043 | 0.0 | AP015043.1 Vigna angularis var. angularis DNA, chromosome 10, almost complete sequence, cultivar: Shumari. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_017426447.1 | 1e-109 | PREDICTED: ethylene-responsive transcription factor ERF118-like | ||||
Refseq | XP_017426448.1 | 1e-109 | PREDICTED: ethylene-responsive transcription factor ERF118-like | ||||
Refseq | XP_017426449.1 | 1e-109 | PREDICTED: ethylene-responsive transcription factor ERF118-like | ||||
TrEMBL | A0A0L9UT79 | 1e-108 | A0A0L9UT79_PHAAN; Uncharacterized protein | ||||
TrEMBL | A0A0S3T2G6 | 1e-108 | A0A0S3T2G6_PHAAN; Uncharacterized protein | ||||
STRING | GLYMA08G30716.2 | 2e-94 | (Glycine max) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF2690 | 34 | 72 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G68550.2 | 7e-27 | ERF family protein |