PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vang0069ss00640.1
Organism
Vigna angularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family bHLH
Protein Properties Length: 690aa    MW: 77473.3 Da    PI: 5.3382
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Vang0069ss00640.1genomeSNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH19.51.8e-065192955
                       HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                HLH  9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                        ++R ++++++f  L   +P       +K++K +iL kA +Y+k+L+
  Vang0069ss00640.1 51 RKQRQQKLRERFLALSATIPGF-----QKMDKKSILDKASNYVKQLE 92
                       599******************7.....7*****************96 PP
2HLH36.58.6e-12237282555
                        HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                        h + Er+RR++i ++f  L   +P +     kK +K++iL +A++Y+++Lq
  Vang0069ss00640.1 237 HIISERKRRQDIAEKFIALSATIPGL-----KKIDKVSILGEAIKYMRQLQ 282
                        8899**********************.....9******************9 PP
3HLH35.12.4e-11509555455
                        HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                         h ++Er+RR+++ ++f  L   +P +      K +Ka++L+ A++Y+k+L+
  Vang0069ss00640.1 509 DHIMAERKRRQELTERFIALSATIPGL-----NKTDKASVLRAAIDYVKQLK 555
                        699***********************8.....6*****************95 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088812.4434291IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.4E-74797IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.19E-55296No hitNo description
SuperFamilySSF474598.64E-1252105IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.103.0E-1152104IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088814.494232281IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474595.23E-15235294IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.4E-9237282IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000836.59E-10237286No hitNo description
Gene3DG3DSA:4.10.280.101.3E-14237291IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003533.7E-12238287IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474592.09E-16503575IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.402505554IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000106.3E-9509554IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.5E-16509571IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.11E-10510558No hitNo description
SMARTSM003531.7E-14511560IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 690 aa     Download sequence    Send to blast
LKSMEESGEN WPSDSYLEAG DDVKDFCFDD EEFASEEDEG DSFPEMKSTD RKQRQQKLRE  60
RFLALSATIP GFQKMDKKSI LDKASNYVKQ LEQRVRELEQ EVQSNKVCAS SSSSSEVNSN  120
GSNQILPEVK KHQEKTQPHA LMMEDSWQNW LSHLGMNDNF GCTSNNGVLF EEMMWLNSTG  180
QGCDSSNKEV ACMEVKEEHS KCCWRKRGVE KHQELEAKGR EKKGTKRART SSEIEYHIIS  240
ERKRRQDIAE KFIALSATIP GLKKIDKVSI LGEAIKYMRQ LQQRIAVLEK ASNNNSVKPF  300
IIAKSHLCSA SCSANSNIEV LPEVEASGLE NEVLIRIYCE KRKDILLNLM TLLQSVHLSV  360
TSSSVLPFGN SLLNIIIVAR EMDCQNEFFY DYDPINDDCD DFFTDIILQP TPPTPFSSES  420
ESDHSFRASN TVQTTSFLPS AAVNAVASKR SAPRTYILSF DSSTVVPATP EPSVPSSLLP  480
AKRALHTQSP TTRPNQASKR TRTSSQTVDH IMAERKRRQE LTERFIALSA TIPGLNKTDK  540
ASVLRAAIDY VKQLKEKVDE LEKQNRKSAA ETVILVNKTD SNGNEDSTNS TETNCSMLPE  600
MEARVLGKEV LIEIHCEKEY GVELKILDHL ENLHLCVTGS SVLPFGNSAL CITITAQMDE  660
EYEMTVNDLV KNLREVLSKS HLVSYSDPY*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1513518ERKRRQ
Cis-element ? help Back to Top
SourceLink
PlantRegMapVang0069ss00640.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150420.0AP015042.1 Vigna angularis var. angularis DNA, chromosome 9, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017407422.10.0PREDICTED: transcription factor bHLH18-like
TrEMBLA0A4D6MN800.0A0A4D6MN80_VIGUN; Transcription factor MYC2
STRINGXP_007135787.11e-167(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF131101230
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37850.17e-43bHLH family protein