PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Vang0066ss00230.1

Organism

Vigna angularis

Taxonomic ID

3914

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna

Family

bZIP

Protein Properties

Length: 409aa MW: 44957.4 Da PI: 10.5144

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Vang0066ss00230.1	genome	SNU	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	45.3	1.8e-14	330	386	5	61
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklks 61 +r+rr++kNRe+A rsR+RK+a++ eLe +v++L++ N++L+ + e+k++ ++ +s Vang0066ss00230.1 330 RRQRRMIKNRESAARSRARKQAYTFELEAEVAKLKEINRELQRKQAEIKEMQKNKDS 386 79******************************************9999999887665 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	2.7E-11	326	390	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	10.645	328	379	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	1.44E-9	330	378	No hit	No description
Gene3D	G3DSA:1.20.5.170	2.4E-13	330	379	No hit	No description
Pfam	PF00170	1.9E-11	330	383	IPR004827	Basic-leucine zipper domain
CDD	cd14707	4.96E-26	330	384	No hit	No description
PROSITE pattern	PS00036	0	333	348	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 409 aa Download sequence Send to blast
MNFRNYGDNN PTWDAMHGKT PAANVGSLLR QPSSVYSLTF DEFQSTMGGV GKEFGSMNMD 60 ELLKNIWTAE ETQALTFSAG TGEGHNLNSI SGGLQRQGSL TLPRTLSQKT VDEVWRDLIK 120 ESCGAHDGNG NGGSSIPQRQ PTLGEMTLEE FLVRAGVVRE DVPQQQQIGK PNNNGWFGNF 180 PRPNNNNGLL LGFQQPNRSN GNMGERVVET NNNLAPKQPP PLSLNSNHSH RPTQQPPLFP 240 KPANLAFASP MHLLNSAPLA SSGRRGGLID HSLNVGLVGL ASGNPEASPS RKISSDVITR 300 SNVDNSPLSP VHYSINRGRK SSAIEKVVER RQRRMIKNRE SAARSRARKQ AYTFELEAEV 360 AKLKEINREL QRKQAEIKEM QKNKDSDPAS QPRVSKIQCL RRTLTGPW*

Sequence ? help Back to Top

Protein Sequence Length: 409 aa Download sequence Send to blast

MNFRNYGDNN PTWDAMHGKT PAANVGSLLR QPSSVYSLTF DEFQSTMGGV GKEFGSMNMD  60
ELLKNIWTAE ETQALTFSAG TGEGHNLNSI SGGLQRQGSL TLPRTLSQKT VDEVWRDLIK  120
ESCGAHDGNG NGGSSIPQRQ PTLGEMTLEE FLVRAGVVRE DVPQQQQIGK PNNNGWFGNF  180
PRPNNNNGLL LGFQQPNRSN GNMGERVVET NNNLAPKQPP PLSLNSNHSH RPTQQPPLFP  240
KPANLAFASP MHLLNSAPLA SSGRRGGLID HSLNVGLVGL ASGNPEASPS RKISSDVITR  300
SNVDNSPLSP VHYSINRGRK SSAIEKVVER RQRRMIKNRE SAARSRARKQ AYTFELEAEV  360
AKLKEINREL QRKQAEIKEM QKNKDSDPAS QPRVSKIQCL RRTLTGPW*

Functional Description ? help Back to Top
Source	Description
UniProt	Involved in ABA and stress responses and acts as a positive component of glucose signal transduction. Functions as transcriptional activator in the ABA-inducible expression of rd29B. Binds specifically to the ABA-responsive element (ABRE) of the rd29B gene promoter. {ECO:0000269\|PubMed:11005831, ECO:0000269\|PubMed:15361142, ECO:0000269\|PubMed:16284313, ECO:0000269\|PubMed:16463099}.

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Vang0066ss00230.1

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: Up-regulated by drought, salt, abscisic acid (ABA), cold and glucose. {ECO:0000269\|PubMed:10636868, ECO:0000269\|PubMed:11005831, ECO:0000269\|PubMed:15361142, ECO:0000269\|PubMed:16284313, ECO:0000269\|PubMed:16463099}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	AP015034	0.0	AP015034.1 Vigna angularis var. angularis DNA, chromosome 1, almost complete sequence, cultivar: Shumari.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_017434239.1	0.0	PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 7
Swissprot	Q9M7Q4	1e-101	AI5L5_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 5
TrEMBL	A0A0S3R306	0.0	A0A0S3R306_PHAAN; Uncharacterized protein
STRING	XP_007156508.1	0.0	(Phaseolus vulgaris)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF1962	34	81

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G19290.1	1e-95	ABRE binding factor 4

Publications ? help Back to Top
Gao S, et al. ABF2, ABF3, and ABF4 Promote ABA-Mediated Chlorophyll Degradation and Leaf Senescence by Transcriptional Activation of Chlorophyll Catabolic Genes and Senescence-Associated Genes in Arabidopsis. Mol Plant, 2016. 9(9): p. 1272-1285 [PMID:27373216] Seok HY, et al. Arabidopsis AtNAP functions as a negative regulator via repression of AREB1 in salt stress response. Planta, 2017. 245(2): p. 329-341 [PMID:27770200]