PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vang0058ss00700.1
Organism
Vigna angularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family bZIP
Protein Properties Length: 306aa    MW: 32509.9 Da    PI: 5.6572
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Vang0058ss00700.1genomeSNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_131.92.9e-10219277563
                        CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
             bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                        kr++r   NR +A rs +RK  +i+eLe+kv++L++e ++L  +l+ l+     l se+
  Vang0058ss00700.1 219 KRAKRIWANRQSAARSKERKMRYIAELERKVQTLQTEATSLSAQLSLLQRDTNGLNSEN 277
                        9***********************************************99998888887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003388.4E-16215279IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.093217280IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1708.7E-9219275No hitNo description
PfamPF001702.5E-9219277IPR004827Basic-leucine zipper domain
SuperFamilySSF579596.61E-11219270No hitNo description
CDDcd147035.55E-25220269No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 306 aa     Download sequence    Send to blast
MDKDKSLGHG GGLPPPSARY SGYSPSGTAF SVKSEPPSSS TSSYLPLAPG ISTPESSAFS  60
HDISRMPDNP PRNRGHRRAH SEILTLPDDI SFDSDLGVVG GADGPSFSDE AEEDLLSMYL  120
DMDKFNSSSA TSTFQMGEPS GAVGASGSAS GAPTSSAENS AVGTLERPRV RHQHSQSMDG  180
STTIKPELLV SGSEDLSAAD SKKAMSAAKL AELALIDPKR AKRIWANRQS AARSKERKMR  240
YIAELERKVQ TLQTEATSLS AQLSLLQRDT NGLNSENSEL KLRLQTMEQQ VHLQDDVNPS  300
GAKDC*
Functional Description ? help Back to Top
Source Description
UniProtPutative transcription factor with an activatory role.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00126DAPTransfer from AT1G06070Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapVang0058ss00700.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150400.0AP015040.1 Vigna angularis var. angularis DNA, chromosome 7, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017425656.10.0PREDICTED: probable transcription factor PosF21
RefseqXP_017425657.10.0PREDICTED: probable transcription factor PosF21
SwissprotQ040881e-125POF21_ARATH; Probable transcription factor PosF21
TrEMBLA0A0S3SFZ70.0A0A0S3SFZ7_PHAAN; Uncharacterized protein
STRINGXP_007150443.10.0(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF55173249
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G06070.11e-110bZIP family protein
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Xu C, et al.
    Control of auxin-induced callus formation by bZIP59-LBD complex in Arabidopsis regeneration.
    Nat Plants, 2018. 4(2): p. 108-115
    [PMID:29358751]