PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Vang0045ss01060.1 | ||||||||
Common Name | LR48_Vigan1300s000700 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
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Family | bZIP | ||||||||
Protein Properties | Length: 325aa MW: 35932.8 Da PI: 7.1645 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 24.8 | 4.7e-08 | 256 | 302 | 17 | 63 |
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 17 ArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 A+rsR RK+++i+eLe+ v++L+ae ++ ele l+++ l +e+ Vang0045ss01060.1 256 AQRSRVRKLQYIAELERNVQALQAEGSEVSAELEFLNQQNLILSMEN 302 89***********************************9998887776 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 5.2E-4 | 245 | 304 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14703 | 4.36E-17 | 247 | 295 | No hit | No description |
SuperFamily | SSF57959 | 6.26E-6 | 256 | 298 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 4.5E-7 | 256 | 299 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 325 aa Download sequence Send to blast |
MGLGLGIVDS ASMANSKGSS GFRNFMYPGK HALLPPKSPF PSVSQGYSDY VQNPAVGLKG 60 GNRPRDGNPH HQRTSSESLV IEEQPSWLDD LLNEPETPVR RAGHRRSSSD SFAYLDMANA 120 SNINYADQDE YKYKSLMSIP SWSSQDFDRS KDARHLPAYV DMNLSKQKNR SWDSFSNAMT 180 NPVGVPSGKD SSAFQSSGLP STPQEADGLA PTATEKQDSV EPGLQDAKSF SEKKDNSHAK 240 SSSSETDTKR AKQQFAQRSR VRKLQYIAEL ERNVQALQAE GSEVSAELEF LNQQNLILSM 300 ENKALKQRLE NIAQEQLIKY CKFL* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Vang0045ss01060.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AP015034 | 0.0 | AP015034.1 Vigna angularis var. angularis DNA, chromosome 1, almost complete sequence, cultivar: Shumari. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_017411452.1 | 0.0 | PREDICTED: uncharacterized protein At4g06598 | ||||
TrEMBL | A0A0L9TIE5 | 0.0 | A0A0L9TIE5_PHAAN; Uncharacterized protein | ||||
TrEMBL | A0A0S3QYV6 | 0.0 | A0A0S3QYV6_PHAAN; Uncharacterized protein | ||||
STRING | XP_007159569.1 | 0.0 | (Phaseolus vulgaris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF5123 | 26 | 37 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G58110.2 | 1e-106 | bZIP family protein |
Publications ? help Back to Top | |||
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